Brassica rapa (field mustard): 103857669
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Entry
103857669 CDS
T03449
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 37f-like
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
3.6.4.10
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03060
Protein export
brp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
103857669
04141 Protein processing in endoplasmic reticulum
103857669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103857669
04131 Membrane trafficking [BR:
brp04131
]
103857669
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103857669
Enzymes [BR:
brp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
103857669
Chaperones and folding catalysts [BR:
brp03110
]
Heat shock proteins
HSP70 / DNAK
103857669
Membrane trafficking [BR:
brp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
103857669
Autophagy
ER-phagy
ER stress-related proteins
103857669
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103857669
Exosomal proteins of other body fluids (saliva and urine)
103857669
Exosomal proteins of colorectal cancer cells
103857669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
Radial_spoke_3
DDR
Motif
Other DBs
NCBI-GeneID:
103857669
NCBI-ProteinID:
XP_033143613
LinkDB
All DBs
Position
A03:9196270..9199132
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AA seq
669 aa
AA seq
DB search
MARSLGANGTVVLAIIFFGCLFAFSTAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEII
ANDQGNRITPSWVGFTDNERLIGEAAKNQAAVNPERTVFDVKRLIGRKFADKEVQKDRKL
VPYQIVDKDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAYLGKKIKDAVVTVPA
YFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSV
LTIDNGVFEVLSTNGDTHLGGEDFDHRIMDYFIKLIKKKHQKDISKDNKALGKLRRECER
AKRALSSQHQVRVEIESLFDGLDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKS
QIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK
DILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSL
TKDCRLLGNFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGR
LSQEEIDRMVKEAEEFAEEDKKVKERIDARNSLETYVYNMKNQVNDKDKLADKLEADEKE
KIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGGAGGESATE
EEDESHDEL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcactcggagcaaacggcaccgttgttctcgcgatcatcttcttcggatgt
ttgtttgcgttttccactgctaaagaagaggctaccaagttgggaacagtgatagggata
gatcttggtactacctactcttgtgttggtgtttacaagaatggtcacgttgagatcatt
gccaatgaccaaggaaaccgtattacaccttcctgggttggtttcactgacaatgagagg
ctcattggtgaggctgctaagaaccaggcggctgttaatcctgagaggactgtctttgat
gtcaagagattgattggccgaaaattcgcggacaaagaggtccagaaggacaggaagctt
gttccttaccagattgtggacaaggatggcaagccatacattcaagtcaagatcaaggat
ggtgagaccaaggttttctctcctgaggaggtcagtgccatgatcttgactaagatgaag
gagactgctgaggcttaccttggcaagaaaatcaaggacgctgttgtcactgttccagct
tacttcaatgatgcccagaggcaggctacaaaggacgctggtgttatcgctggtctcaat
gttgcccgaatcatcaacgaacccactgctgctgctattgcctacggtcttgacaagaag
ggtggtgagaagaacatccttgtctttgaccttggtggtggtacttttgatgtcagtgtc
ttgaccattgataacggagtgttcgaggttctctccacaaatggtgacactcacttggga
ggtgaggactttgaccacaggatcatggactactttatcaagttgatcaagaagaagcac
caaaaggacatcagcaaagacaacaaggctcttggtaagctccgcagggaatgtgagaga
gccaagagagctcttagtagccagcaccaagtccgtgtagagattgagtccctctttgat
ggtcttgatttctcggagcctctcaccagagctcgtttcgaggagcttaacaatgactta
ttcaggaagacaatgggaccagtgaagaaggccatggatgatgctggtcttcagaagagt
cagatcgatgagattgttcttgttggtggaagcactaggatccccaaggttcagcagctg
ttgaaggacttcttcgaagggaaagagccaaacaagggtgtgaaccccgacgaagctgtt
gcctatggtgcggcggtccagggtggtattctgagcggagaaggcggtgacgagaccaaa
gacatccttcttcttgacgttgcgccactcactttgggtattgagaccgtgggaggagtg
atgacaaaactgatcccgagaaacacagttattccgaccaagaagtctcaggttttcacg
acgtaccaagaccagcagaccaccgtctccattcaggtctttgaaggtgagcgaagtctc
accaaggactgtaggctgctcgggaacttcgacctcaccggaatcccaccggctccaaga
ggaacacctcaaatcgaggtgacgtttgaagtggatgcgaacggtatcctgaacgtgaaa
gcagaggacaaggcgagtggtaaatcagagaagatcacaatcacaaacgagaaggggcgt
ctgagccaggaagagatcgaccggatggtgaaggaggcagaggagtttgcagaggaagac
aagaaggtgaaggagagaatcgacgcgaggaacagcctggagacatacgtgtacaatatg
aagaaccaagtgaacgacaaggacaagcttgcagacaaactggaagcagacgagaaggag
aagattgaagcagcgacgaaagaggcgttggagtggcttgacgagaaccaaaactcggag
aaagaagagtatgacgagaagttgaaggaagtagaggcagtgtgtaacccaatcatcacc
gctgtttaccagaggtcaggtggtgcaccaggcggtgcgggtggagaatcagcaaccgag
gaggaagatgagtctcatgatgagctctaa
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