Brassica rapa (field mustard): 103857749
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Entry
103857749 CDS
T03449
Name
(RefSeq) class V chitinase
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00520
Amino sugar and nucleotide sugar metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
103857749
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
103857749
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Motif
Pfam:
Glyco_hydro_18
Methyltransf_34
Motif
Other DBs
NCBI-GeneID:
103857749
NCBI-ProteinID:
XP_009133224
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Position
A01:complement(5748834..5750885)
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AA seq
379 aa
AA seq
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MSSTKPISLLVSITFCFSLLLSSSSAQSVVKASYWFPGSEYPVTDIDSSLFTHLFCAFAD
LNSQTNQVTIASASQQKFSTFTQTVQRRNPSVKTLLSIGGGAADKTAFASMASNPTSRKS
FIDSSIRLARSNGFHGLDLDWEYPSSATEMSNFGTLLREWRSAVVAEASSSGRQRLLLAA
AVFYSNNYYSVLYPVQAVADSLDWVNLMAYDFYGPGWSRVTGPPAALYDPSNAGPSGDAG
VRSWTQAGLPAKKAVLGFPYYGYAWRLSNANSHSYYAPTTGPAISADGSIGYGQIRKFIV
DNRATTVYNSSVVGDYCYAGTTWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGL
SRAATRAWDAAATTRTIQK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccacaaaacccatatcactccttgtctccatcactttctgcttctctctcctc
ctcagttcatcctccgcccagtccgtcgtcaaagcttcatactggttcccagggagtgag
tatcccgtcaccgacattgactcatctctcttcactcacctcttctgcgccttcgctgac
ctcaactctcaaaccaatcaagtcaccatcgcctccgcgagccagcagaaattctccacg
ttcactcaaaccgtccaacggcgaaacccttcagtgaaaacccttttgtccatcggcggt
ggagccgctgataaaaccgcgtttgcgtccatggcaagtaaccccacttctcgaaaatcg
ttcattgattcttcgataagacttgcgagatcgaatggcttccacggtcttgacctagac
tgggagtatccgagcagtgcgacggagatgagcaacttcgggacgctgcttcgagaatgg
cggtcagcggttgtagcagaagctagtagcagtggtagacaacgtttgcttttggcggct
gcggttttctactccaacaactactattctgtactgtacccggttcaagcggttgccgac
agtctggactgggttaatcttatggcatatgatttttatggaccgggttggtctagagta
accggtccacctgccgctttgtatgacccttcaaacgcaggtccaagtggcgacgctgga
gtaagatcatggacacaagctggacttccagcgaagaaagcagtcttgggatttccatac
tacggctacgcatggcgtctttcaaacgcaaacagtcacagctactacgcgcctacaacc
ggacctgcgatatcagcggacggttctatcggatacggtcagataaggaagttcatagtt
gataacagagcaacaacggtttataactcctcggtggttggagattactgttacgcaggg
acgacatggattggatacgatgataatcagagtatcgtgacgaaagtgagatacgctaag
cagagaggtttgcttggttacttctcgtggcatgttggtgctgacgataattctggtcta
tctcgtgcagcgacacgtgcatgggatgctgcggcaacgaccagaactatacagaagtaa
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