Brassica rapa (field mustard): 103857789
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Entry
103857789 CDS
T03449
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103857789
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103857789
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
YtxH
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
103857789
NCBI-ProteinID:
XP_009133264
UniProt:
M4C791
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Position
A03:9627023..9628779
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AA seq
368 aa
AA seq
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MESELIALFETAKKAADAAAVDGLTSSSPEVSQSLDALEKLKTFPVTYNTLVATQVGKKL
RSLAKHPVEEIKSVATDLLETWKRVVIEETTSKAKKTESTNGCKEVKLERKDVNPAPVKV
QKLQRGDSAKSIKVERKEPDSKVKVERKEPDTKVKMDHRGQTTVKDEKVSKETLSSVKAS
DKAPNGAPKLTSMVKCNDPVRDKIRELLVDAMSKVHGESDEYDRARVVGCDPIRVAVSVE
SHMFEKLGRSTGAQKVKYRSIMFNLRDSNNPDLRRRVLTGEVSPEKLITLSGEEMASDKR
KQETNQIKEKFLFDCERGQAPKASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVN
CDNHWKFC
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgaattgattgcattgttcgagacggcgaagaaggcggcagatgcggcggct
gtcgacggtcttacctcctcaagcccggaggtttctcaatctctcgatgcattagagaaa
ctcaagacgtttcccgtcacgtacaacacgctcgtcgcaactcaggtagggaagaagctg
aggtctcttgcgaaacatcctgttgaggaaatcaaaagcgtggctactgatctgcttgag
acatggaagagagttgtcattgaagagacgacatccaaggctaagaagaccgaaagcaca
aacggttgcaaagaggttaagttggagaggaaggatgtgaaccccgcgcctgtgaaagtc
cagaagcttcagaggggtgactcagctaagagtatcaaggttgagagaaaggaaccagac
agcaaagtgaaggtagagagaaaggaaccagacaccaaagttaagatggatcatcgtggt
cagactactgtcaaggatgaaaaagtctcaaaagaaacgctatcaagtgtgaaggcttca
gacaaggcacctaatggtgctccaaagctaacttcaatggtcaaatgcaacgatcctgtg
cgtgacaagatccgtgagctgcttgtggacgccatgtccaaggttcatggagaatctgat
gagtacgacagagcgagagtggttggatgtgatccaatccgtgttgctgtctctgtggag
tctcatatgtttgagaaactgggccggtcaacgggagcgcagaaggtcaagtacagatct
ataatgttcaacctgagggacagtaacaacccggacctgagaaggagagttctcacaggg
gaggtgtcaccagagaaactcatcacactgtcgggtgaagagatggcgagcgacaagagg
aaacaagagaccaaccagatcaaggagaagttcttgttcgattgtgagcgtggtcaggca
ccaaaagcaagtactgaccagttcaagtgtgggcgttgtggtcagcgcaaatgcacgtat
tatcagatgcagactaggagtgctgatgagccgatgacgacttatgttacatgtgttaac
tgtgacaatcactggaagttctgttga
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