Brassica rapa (field mustard): 103858006
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Entry
103858006 CDS
T03449
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINAT1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103858006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103858006
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103858006
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103858006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
zf-Di19
zf-RING_6
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
103858006
NCBI-ProteinID:
XP_018513518
UniProt:
M4C7S1
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All DBs
Position
A03:complement(10641913..10644374)
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AA seq
307 aa
AA seq
DB search
MAPGGTTYKEALESNWIGLDYEVRMSKVEATNKPAKSASGAIGKIRSSNGSGVHELLECP
VCTNLMYPPINQCPNGHTLCSSCKQQVQNTCPTCRYELGNIRCLALEKVAESLEVSCRYQ
SLGCHDIFPYYSKVKHEQHCRFRSYDCPYAGSECSVTGDIPTLVEHLKVDHKVDMHSGCT
FNHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGDENEAKK
FSYSLEVGAHSRKLTWQGIPRSIRDGHKKVRDSQDGLIIPRNMALFFSGSDKEELKLRVT
GRIWREE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggtggcactacttacaaagaagccttggagtctaactggataggcttggat
tacgaggttaggatgtctaaagtggaggctactaacaaaccagccaaatcagctagtggc
gccattggaaaaatccgttcaagcaatggcagtggtgttcatgagcttcttgaatgtccg
gtttgcacaaatctcatgtatcccccaattaatcagtgccccaatggccacacgttgtgt
tcaagctgcaaacaacaagtgcagaacacgtgccctacatgccgttacgagctcggcaac
ataagatgcttggctctcgagaaggttgctgaatcgttagaggtttcgtgccggtaccaa
agcttagggtgtcacgacattttcccgtactacagcaaggtcaagcacgagcagcactgc
aggtttcgatcctacgactgcccttacgctggctctgagtgttcagtgacgggagacatt
cctaccctcgttgagcatctcaaagttgatcataaagtcgatatgcatagtggctgcact
ttcaaccaccgttacgtcaagtctaatcctcaagaagttgagaatgctacgtggatgctc
acggtgttcaactgttttggaagacagttctgtttgcactttgaggcgtttcagctgggg
acggcgccggtgtacatggcgtttttgcggttcatgggagacgagaacgaggctaagaag
tttagttacagcttggaagttggagctcacagccgtaagctgacgtggcaagggattccg
agaagcatcagagacggtcacaagaaggtccgggatagtcaggacggtctcatcatccct
aggaacatggctttgttcttttcaggcagtgacaaagaagagctcaagttgagagtcacc
ggacggatttggagagaagagtag
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