Brassica rapa (field mustard): 103858082
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Entry
103858082 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: endochitinase At2g43610-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00520
Amino sugar and nucleotide sugar metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
103858082
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
103858082
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Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
Motif
Other DBs
NCBI-GeneID:
103858082
NCBI-ProteinID:
XP_009133620
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Position
A03:complement(11014605..11017587)
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AA seq
280 aa
AA seq
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MATHNVLLKNXLMIFLFTLTIMTETAFSRNCGKTGCKGNMCCSRWGYCGTNAYCGTGCQS
GPCKSKPKPTPTPSGSGGLNAGPRGTIASVVTPAFFNGIMSKVGRGCPAKGFYTRQAFIA
AAQSFAAYKGTVAKREIAAMLAQFSHESGSFCYKEEIARGRYCSPSTTYPCQPGKNYYGR
GPIQITWNYNYGAAGKFLGLPLLKDPDMVARSPTVAFKCAMWFWNKNVRPVLSRGFGATT
RRINGGECDGGRPAAVQSRVNHYLDFCKKLGVTPGTNLKC
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacacaatgttctactcaaaaacnnactcatgattttcctcttcactttaacc
atcatgacagaaaccgcattttctcggaactgcggtaaaaccggttgtaaaggcaacatg
tgctgcagcagatggggatattgtggcacaaacgcttactgcggcacgggatgtcagagt
ggaccttgcaaatccaaacctaaacctactccaacacccagcggtagcggcggtctaaac
gctggtcctcgcggtaccatagcaagcgttgttaccccagcgttcttcaacggcatcatg
agtaaagtcggacgtggttgcccagccaaagggttctacactcgccaggcgttcatcgcg
gccgctcaatcgtttgcagcctacaaaggaaccgttgccaagcgtgagattgcagccatg
ttggctcagttctctcacgaatctggaagtttctgctacaaagaagaaatagctagggga
aggtactgctcaccgagcacaacgtacccatgtcaaccgggcaagaattactacggtcgt
ggtccaatccaaatcacatggaactacaactacggtgcagccgggaagtttcttggactt
cctctcttgaaggatccagatatggtggctcgtagcccaaccgtggctttcaaatgtgcc
atgtggttttggaacaaaaatgtgcgtccggttttgagccgaggatttggagccaccacg
aggaggatcaatggcggtgagtgtgacggtggacgtccagccgcagtgcagagtagggtt
aaccattacttggatttctgcaagaagcttggggtcactcctggaaccaacctcaaatgt
tga
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