Brassica rapa (field mustard): 103858163
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Entry
103858163 CDS
T03449
Name
(RefSeq) axial regulator YABBY 1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103858163
Transcription factors [BR:
brp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
103858163
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GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
Ccdc124
HMG_box
Zn_ribbon_12
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
103858163
NCBI-ProteinID:
XP_009133711
UniProt:
A0A398A4U9
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Position
A03:complement(11340076..11342600)
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AA seq
225 aa
AA seq
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MSMSSMSSPSSAVFSPEPLSPSDHLCYVQCNFCETILAVSVPYTSMFKTVTVRCGCCTNL
LSVNMRSAALPASNQLQLGPHSYFNTQNILEELRDAPSNMNMMMMNQHPNMNDIPSFMNI
HQHEITKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFP
HIHFGLAPDNQPVKKTNMPQQDGENNMGMKEGLYAPAAHVGVAPY
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcgtctatgtcttctccttcctcagctgttttttcaccagagcccctctct
ccttcagaccatctttgctatgtccaatgcaacttttgtgaaacgattcttgcggttagt
gttccttacacaagcatgttcaagaccgtaaccgtccgatgcggttgctgtactaatctt
ctttctgtgaacatgagatcggccgcccttccagcttctaaccagctccagcttggtcct
cactcttacttcaatacacaaaatattctggaggagctgagagatgcaccttcaaacatg
aacatgatgatgatgaatcaacatcctaatatgaatgacataccgtctttcatgaatatt
catcaacatgaaattactaaagcaccacccgttaaccgccctccagagaaaagacagaga
gtcccatccgcatataaccgatttatcaaggaggagatccaacgtatcaaagctggtaat
cctgatataagccacagagaagcctttagtgctgctgccaagaattgggcccactttcct
cacatacacttcggactcgcaccagacaatcaacccgtgaagaaaaccaacatgccccaa
caggatggagagaacaacatggggatgaaagaaggattatacgctcctgcggctcacgtt
ggtgtggctccttactaa
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