KEGG   Brassica rapa (field mustard): 103858235
Entry
103858235         CDS       T03449                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-3
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03010  Ribosome
brp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    103858235
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103858235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:brp03011]
    103858235
   04121 Ubiquitin system [BR:brp04121]
    103858235
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:brp04147]
    103858235
Ribosome [BR:brp03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    103858235
  Archaea
    103858235
Ubiquitin system [BR:brp04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   103858235
Exosome [BR:brp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103858235
  Exosomal proteins of colorectal cancer cells
   103858235
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD DUF2604 UBL_UBAC1 TBK1_ULD Ubiquitin_5 Thioredox_PDIA6_C OTU1_UBXL
Other DBs
NCBI-GeneID: 103858235
NCBI-ProteinID: XP_009133797
UniProt: A0A397ZXT8
LinkDB
Position
A03:11985494..11986168
AA seq 157 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE
CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGGEA
NT seq 474 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctcacggggaagacaatcaccctcgaagtcgagtcctcc
gacaccatcgacaatgtcaaggccaagatccaggacaaggaaggcatccctccggaccag
cagcgactgatcttcgccgggaagcagctggaggacggacgcaccctcgccgactacaac
atccagaaggagtccactctccacctcgtcctccgtctccgcggtggcgccaagaagagg
aagaagaagacgtacaccaagccgaagaagatcaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggtggatggctccggcaaggtccagcgtctgaggaaggag
tgccctaacgcgacgtgtggtgcagggacgttcatggctagccatttcgatcgtcactac
tgtggtaagtgtggtctaacctacgtttaccagaaggaaggtggcgaagcatga

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