Brassica rapa (field mustard): 103858421
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Entry
103858421 CDS
T03449
Name
(RefSeq) non-lysosomal glucosylceramidase isoform X1
KO
K17108
non-lysosomal glucosylceramidase [EC:
3.2.1.45
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00511
Other glycan degradation
brp00600
Sphingolipid metabolism
brp01100
Metabolic pathways
brp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
103858421
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
103858421
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103858421
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
103858421
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Ortholog
Paralog
GFIT
Motif
Pfam:
GH116_catalytic
Glyco_hydr_116N
FrhB_FdhB_N
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
103858421
NCBI-ProteinID:
XP_018513385
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All DBs
Position
A03:complement(12871533..12878055)
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AA seq
953 aa
AA seq
DB search
MSEENFMDNGEDVKSSATKVDPAVPPSLTWQRKIDSDAKAPREFALTAKEILQMAPVGIR
LWFLVREEAAKGRLAFIDPFSKHSVTSSHGVPLGGIGSGSIGRSFKGEFQRWQLFPPKCE
DEPVLANQFSAFVSRANGKNYSSVLCPRNPKLAKQESESGIGSWDWNMKGDKSTYHALYP
RSWTIYEGEPDPELRIVCRQVSPFIPHNYKESSFPVSVFTFTIHNLGDTTADATLLFTWA
NSVGGDSEFSGGHYNSKIMMNDGVKGVLLHHKTANGLPSLSYAISAQETEGVSVSVCPFF
TVSGKQNGITAKDVWEIIKEHGSFDHLDASEASMQSEHGSSIGAAVAASATVLPGESRIV
TFSLAWDCPEVQFPSGKIYSRRYTKFYGTHGDAAAQIAYDAILGHSQWESWIEDWQRPIL
EDKRLPAWYPITLFNELYYLNSGGTLWTDGSSPLHSLAGVREKKFSLDKSQSGLKSIIDV
PQQQNDTAVSVLEKMASTLEQLHASTASNSAFGTKLLEEGEENIGHFLYLEGIEYRMWNT
YDVHFYASFALVMLFPKLELSIQRDFAAAVMLHDPTKVKTLSEGQWVQRKVLGAVPHDLG
INDPWFEVNGYNLHNTDRWKDLNPKFVLQVYRDVVATGDKKFALAVWPSVYVAMAYMAQF
DKDGDGMIENEGFPDQTYDTWSASGVSAYCGGLWVAALQAASALAREVGDKNSQDYFWSK
FEKAKVVYEKKLWNGSYFNYDTSGSRYSSSIQADQLAGQWYARASGLMPIVDEDKARMAL
EKVYNFNVMKIKDGKRGAVNGMHPDGKVDTASMQSREIWSGVTYALAATMIQEGLVDKAF
QTASGIYEAAWSETGLSYSFQTPEAWNTNDQYRSLTYMRPLAIWSMQWALTRTSNNKQKQ
FGLEPELEPEPSSLMKHDIGFSRVSRLLNLPNEASAKGTVQTLFEYACRRMMS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaaaacttcatggataatggtgaagatgtcaagtcttctgctacaaaagtt
gatccggcagtacctccatctttgacatggcaaagaaagatagacagtgacgcaaaggct
ccccgggaattcgctctgactgctaaagagattctccagatggctcctgtcggcattcgg
ttatggtttcttgtcagagaagaagctgccaagggaaggttggccttcatagacccattt
tctaagcactctgtaacgtcttcccatggtgttccacttggaggtattggttctggtagc
ataggaaggagttttaaaggtgaattccagcgatggcagctattccctccaaaatgtgaa
gatgaaccagttcttgcaaatcagttctcagcatttgtttctagggccaatggtaaaaac
tactcaagcgtgttatgtcctaggaacccaaagctggcaaaacaagagtcggaatctgga
attggttcatgggactggaatatgaaaggagacaagtctacatatcatgctttatatcct
aggtcttggacaatatatgagggtgaacctgatccagagcttagaattgtttgtcgtcaa
gtttcaccttttatacctcacaactacaaagaaagcagttttcctgtttctgttttcact
ttcaccattcataatctgggagacactactgcggatgcgacattgctctttacttgggcg
aattctgttggaggagactcagagttctcaggtggccactacaactccaagataatgatg
aatgatggagtcaagggtgtgctcttacaccataaaacagcaaacggattaccatcattg
tcatatgcgatttcagctcaggagaccgaaggtgtaagtgtctcagtctgccctttcttc
acagtatctggaaagcaaaatggaatcacagcaaaagatgtgtgggagattatcaaagag
catggctcttttgatcaccttgatgcttctgaggcgtcgatgcaatctgaacatgggtca
tcgatcggggcagcagtagctgcttccgcgacagtcttaccgggagagtcacgcattgtc
acattttctttggcttgggactgccctgaagtgcaatttcctagtggtaaaatatattca
aggcgttacacaaagttttatggcactcatggcgatgccgcagcacaaattgcttatgat
gctattcttggacatagtcaatgggagtcttggatagaagactggcagagaccaatactt
gaagataaaaggctgcctgcatggtaccctatcactctcttcaatgagctttattatctt
aattctggaggaactctttggacagatggatcatctccactacacagcttggcaggagtc
agagagaagaagttctcacttgataaatctcaatctggtctgaagagcatcatagatgta
ccacagcagcagaatgatacagctgtctcggttcttgaaaaaatggcttcaacgcttgag
caacttcatgcatcaacagcatcaaactctgcatttggcaccaagctactagaagaagga
gaagagaacattgggcactttctctacctagaaggaatcgagtaccgtatgtggaacacc
tacgacgttcatttctacgcgtctttcgcgctggtgatgctttttccaaaactagaactt
agcatccagagagactttgctgctgcggtcatgctacacgatcccactaaagtgaaaact
cttagtgaaggacaatgggtccagaggaaagttcttggtgcagttcctcatgacttaggg
atcaacgatccttggtttgaggttaatgggtacaatcttcacaatactgatcggtggaaa
gatttaaaccccaaattcgtcctccaggtctacagggacgtagttgctactggagacaaa
aagtttgcattagcggtatggccctcagtgtatgttgcaatggcgtatatggctcagttt
gacaaagatggcgatggaatgattgagaacgaagggtttcctgatcagacgtacgataca
tggtccgcatctggtgttagcgcttactgtggcggactttgggtggctgcactgcaagct
gcatccgcattggctcgtgaagttggtgacaagaactctcaggactatttttggtcaaag
tttgagaaggcgaaggttgtgtacgagaagaagttgtggaatggatcatattttaattat
gataccagtggaagtcgatatagctcgtctatacaagctgatcaactagctggtcaatgg
tacgcgagagcatcaggtcttatgcctattgtagatgaagacaaggctagaatggctttg
gagaaagtttacaacttcaatgtgatgaagattaaagatggaaaacgaggggccgtaaac
gggatgcaccctgatgggaaagttgatacagcatcgatgcaatcacgagagatatggtct
ggtgttacttacgcgctggctgcgacaatgatccaagaaggtttagttgacaaggcgttt
cagactgcaagtggtatatatgaagctgcctggtcggaaaccggactgagttactcgttt
caaacgcctgaagcttggaacacaaatgatcagtatagatcactgacttacatgcgtccc
cttgccatatggtctatgcaatgggcactgacaagaaccagtaacaacaaacagaaacaa
tttggtctggaacctgaactagaaccagagcctagttccctaatgaaacatgatatcggt
ttctccagagtttctaggcttcttaacctaccaaatgaagcatcagcaaaaggcacagtt
cagactttgttcgagtatgcttgccggagaatgatgtcatag
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