Brassica rapa (field mustard): 103858475
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Entry
103858475 CDS
T03449
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Module
brp_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103858475
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103858475
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
103858475
NCBI-ProteinID:
XP_009134090
UniProt:
A0A398A5U9
M4C8W7
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Position
A03:13131364..13134073
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AA seq
403 aa
AA seq
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MTCISSAFKALCLSLLFLNAVASRPTNRPKVFNVQRYGAKADGKADNTKAFTNIWKSACT
RKGGNSKIYVPKGTFYLGGVQFVGPCANQIEFVIDGTLLAPSNPRDIKNDTWIQFRYINN
LIISGAGTLDGQGKESWPLNDCHKNPSCPKLAMTMGFAFVNNSRINGITSLNSKMGHFNF
FSVHHFNITEVTITAPGDSPNTDGLKFGFCSNINISKTHIGTGDDCIAILSGTTNMDISN
VNCGPGHGISVGSLGKNKEEKDVNGLTVRDIVFNGTSDGIRIKTWESSASKILVSNFVYE
NIQMINVGNPINIDQKYCPHPPCEKKGQSHVQIQDLKLKNIYGTSTNKVAVNLQCSKSFP
CKKVELIDINLEHKGVEGGPSTAVCENVDGSARGTMVPQHCLN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgacttgcatttcttctgcgtttaaggctttgtgtttgtctctcttgttcctcaatgcc
gttgcaagtcgtccgaccaataggccaaaggtttttaatgtccagcgctatggtgccaaa
gctgacggaaaagctgataacaccaaggcgttcacaaacatatggaaaagcgcatgcaca
aggaaaggtggtaatagtaaaatctacgtaccgaaaggaacgttttatcttggtggtgta
cagttcgtagggccatgtgcgaatcagattgaattcgttatcgatggaactttattggct
ccttcaaaccctagggacattaagaatgacacatggatccagttcaggtacattaacaat
cttattatctccggtgccggtacactcgacggccaagggaaagagtcttggccactaaat
gactgccacaaaaaccccagttgtcctaagctagctatgaccatgggatttgcattcgtg
aacaactcaagaatcaatgggataacgtcactcaacagcaaaatgggacacttcaacttc
ttttctgtccatcacttcaacatcactgaagtcactataacagctcccggcgacagtcca
aacaccgatgggctaaagtttgggttctgtagcaacattaacatctccaagacacacatt
ggtacaggagacgactgtatagctatcctttccggaaccactaacatggatatctctaat
gtcaattgtggtcctggacatgggatcagtgtcggaagcttagggaagaacaaagaagag
aaggacgttaatggcttaaccgtaagagacatagtctttaacggcactagtgatggtatt
cggatcaagacttgggaatcttcagcttcgaagatattggtttctaactttgtgtacgag
aatattcaaatgattaatgttggaaaccctatcaacatcgaccagaagtattgtcctcac
ccaccttgtgaaaagaagggacaatcacacgttcaaatccaagatcttaaattaaagaac
atatatggaacatcgacgaacaaagtggcggtgaatctacaatgtagcaagagctttccg
tgcaagaaggttgagctaattgacattaacctagagcataagggagtcgagggtggtcct
tccactgcggtatgtgagaatgttgacggttctgcacgtggcacgatggttcctcagcat
tgtctgaactga
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