Brassica rapa (field mustard): 103858687
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Entry
103858687 CDS
T03449
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
KO
K14793
ribosomal RNA-processing protein 9
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103858687
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
90S particles
Other 90S particles
103858687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Lar_N
WDR90_beta-prop_4th
TFIIF_alpha
eIF3_subunit
Motif
Other DBs
NCBI-GeneID:
103858687
NCBI-ProteinID:
XP_009134334
UniProt:
M4C9D5
LinkDB
All DBs
Position
A03:complement(14219440..14222104)
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AA seq
490 aa
AA seq
DB search
MKHPKGGGFKRGGKKGSTDADPFFEQETKKRRKVSYDDEDIESIDSDAEENGFHGEDRKG
AAEEEEDEFADETAGEKRKRLAEALLLRTREAQRRQREERDDDDEDDEDDDIVKTLMKKQ
QEDSGRVRRAISSSVQEPLSSDEFSIIVKHRKSVVSVALSDDDTRGFSASKDGTILHWDV
SSGKSDKYKWPSDEVLKSHGMKVREPRSKKHSRESLALAVSSDGRYLATGGVDRHVHIWD
VRTREHVQAFPGHRNTVSCLCFRHGTAELYSGSFDRSVKAWNVEDKAFVQDSFGHQDEIL
AIDALRKERALTVGRDRTMLLHKMPETSRTIYRAPASSLESCCFISDTEYLSGSDNGTVA
LWGMLKKKPVFLLKNAHSIVADGTTTNENGDHDYVNSSTTNSWVSSVAVCRGSDLAASGA
GSGFVHLMAVEAGAIRPLFKLPLTGFVNSMAFAKSGKFLIAGVGQETRFGRWGCIKSAQN
GVAIHPLRLS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacccgaaaggtggaggctttaagagaggcggcaagaagggctcgaccgatgcg
gatcccttcttcgagcaagagacgaagaaacggaggaaagtcagttacgacgacgaagac
atcgagtctattgactccgacgccgaagaaaacggctttcacggcgaagataggaaagga
gctgcggaggaggaagaggatgagtttgcagacgagacggcgggagagaagcggaagagg
ttagctgaggcgttgctgttgcgaacgagggaagctcagaggaggcagcgtgaagaacgt
gatgatgatgatgaagacgatgaggatgatgatattgtcaagacattgatgaagaagcag
caggaggatagtggtagggttcgaagagccatttcatccagtgttcaggagccactgagt
agtgatgagtttagcattattgtcaagcaccgaaagtctgttgtctccgttgctctctct
gatgacgacactagaggattctcagcttccaaagacggtactattctccattgggatgtg
tcttctggtaaaagcgacaaatacaaatggccaagtgatgaagttctgaagtctcacggg
atgaaagtgagggagcctcggagtaaaaaacacagtagagagtctcttgccttagccgtt
agctctgacggtcgttatttggcgactggtggagttgataggcatgttcatatatgggac
gttcgtaccagagaacatgttcaggcctttccaggtcacaggaacactgtttcttgccta
tgtttcagacatggaacagcggagctctactctggttcttttgatcggagtgtcaaggcg
tggaatgtggaagataaagcttttgtgcaagacagttttggacaccaggatgagatccta
gccattgatgcgcttaggaaggagcgtgcacttactgttggaagagataggaccatgcta
ttacacaagatgcctgagacgagccgtacgatttaccgtgcacctgcatcgtctcttgag
agctgctgtttcatcagtgacactgagtacctgtctggttcggacaacggaactgttgcg
ctttggggcatgttgaaaaagaagccggtgtttctcctcaagaatgcacattccattgta
gctgatggaaccaccactaatgaaaatggtgatcatgattatgtcaactcttccacaacg
aattcttgggtcagttcagttgctgtgtgcagaggtagtgaccttgctgcatctggagct
ggtagtggttttgtgcatttgatggctgttgaagcaggtgccattcgacctttattcaag
cttccactgactggatttgtgaactctatggcttttgcaaaatccggtaaatttctgatt
gctggtgttggacaggagacgagatttggaaggtggggatgcataaagtctgcgcaaaat
ggtgtggcaatacatcccttaaggctgtcataa
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