Brassica rapa (field mustard): 103858779 Help Entry 103858779         CDS       T03449                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism brp  Brassica rapa (field mustard) Pathway brp03430   Mismatch repair Brite KEGG Orthology (KO) [BR:brp00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     103858779  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:brp03400]     103858779 DNA repair and recombination proteins [BR:brp03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      103858779 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor Motif Other DBs NCBI-GeneID:  103858779 NCBI-ProteinID:  XP_009134448 UniProt:  M4C9L7 LinkDB All DBs Position A03:complement(14726705..14734163) Genome browser AA seq 1337 aa AA seqDB search MAPSRRQISGRSPLVNPQRQITSFFGKSASSSSPSPSPLSNTKTPKSKPNPNSPSPSPLS NTKIPKSNSNPSSPPLSNNKLPKSNPPARSPSPGPTTPSPVHPKLKKPLLVIGQTPSPPK FTETTYGDEVVGKQVRIYWPLDKKWYDGSVTSYNKGEGKHVVEYEDGEEESLDLGKEKIE WVVEGDSVNRFKRLRRGASAFRRVVTDEDEDVEMGNVEEEKEDKSDGDDSSDEDWGKNVG KEVCESEEDDVELDAEDDTMDEEEIVEEKDEETPSKTDSRKRKKTSEVAKPGVEKKIKTD KVTTFKGFKASVVEPVKKIGEADKVVKSLDDNMLDGDALARFGARESEKFRFMGIDRRDA KRRRPTDENYDPRTLYLPPDFVKRLTGGQRQWWEFKSKHMDKVLFFKMGKFYELYEMDAH VGAKELDLRYMKGEQPHCGFPEKNFSVNIEKLVQKGYRVLVVEQTETPDQLERRRKEKGS KDKVVKREICAVVTRGTLTDGEMVLTNPDASYLMALTEGGESLTDEKAEHNFGVCLVDVA TKKIILGQFKDDQDCSALSCVLSEIRPVEVIKPANALSSATERTIVRHTRNPLVNNLVPL SEFWDAEKTIHEIGILYKGFSCQPSSAYSGEGKVLGDPPLNNESGSSCLPKMLSELANGD KDGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNFTVKQHMVLDAAALENLE IFENSRNGGVSGTLYAQLNQCITASGKRLLKTWLARPLYNPELIKERQDAVAILRGENLP YSLEFRKALSRLPDMERLIARIFSSIEASGRNGDKVVLYEDVAKKQLQEFISTLRGCETM VEACSSLRASLEHDNSRRLRHLLTPGQSLPNISPFIKYFKDAFDWVEAHDSGRVVPHEGA DEEYDFTCKTVKELEVSLTKHLKEQRKLLGDASIKYVTVGKDEYLLEVPESLSGSIPQDY ELCSSKKGVFRYWTPTIKKLLKELAQAKSEKESALKSISQRLIGRFCEHQEEWRQLVSAT AELDVLISLAFASDSYEGVRCRPVISSSKSVDVPHLSATGLGHPVLRGDSLGRGSFVPND VKIGGAKQASFILLTGPNMGGKSTLLRQVCLAVILSQIGADVPAETFELLPVDRIFVRMG AKDHIMAGQSTFLTELSETAVMLSSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIDK VQCRGMFSTHYHRLSMDYQTNPQVSLCHMGCQVGEGSGGVEEVTFLYRLTPGACPKSYGV NVARLAGLPDDVLQRAVIKSQEFEGLYGKNHKKADRKMAEMIKQIISGVASDSDTATSKH LLSELHYKANTYLRLTN NT seq 4014 nt NT seq  +upstreamnt  +downstreamnt atggcgccgtctcgccgtcagatcagcggaaggtctccgttggtcaatcctcagcgtcaa atcacctccttcttcggcaaatccgcttcatcttcttctccctctccatcgccactctcc aacaccaaaacccccaaatcaaaacctaaccctaattctccgtctccatcgcctctctcc aataccaaaatccccaaatctaactctaaccctagctctccgcctctctccaataacaaa ctccctaaatcgaatcctcctgctcgtagtccaagccccggtccgacgactccttctcct gtacaccccaagctcaagaagccactcctcgtcatcggacagacaccttcgcctccgaaa tttacggaaactacgtatggagacgaagtggtggggaagcaagttaggatttattggccg ttggataagaaatggtacgatggaagcgtgacatcgtacaataagggtgaaggtaagcat gtggttgagtatgaagatggggaagaggagtctttggatttagggaaggagaagatcgaa tgggtggttgagggggactcagtaaataggtttaagcgattgagaagaggagcttcggct ttcagaagagttgtgacggatgaagatgaggatgtggagatgggtaatgtggaagaagag aaagaagataaaagtgatggtgatgattctagtgatgaggactggggaaagaacgtgggg aaggaggtgtgtgagagcgaagaagatgatgtggagttggatgctgaggatgatacgatg gatgaagaagagatagtggaggagaaagatgaagaaactccttccaaaactgactctaga aagcggaagaagactagtgaagtagcgaaaccaggtgttgagaagaaaatcaagactgat aaagttactaccttcaaaggttttaaggcttctgtggtggaacctgtgaagaagattgga gaagctgataaggttgtcaagagtttggatgataacatgttggatggggatgctctggct agattcggtgcgcgtgaatctgagaaatttcgcttcatgggaatagaccgcagagatgca aaaaggagacgacctaccgatgagaattatgatccgaggacactctaccttcctcctgat tttgtcaagagattaacaggaggccagagacaatggtgggagtttaaatcaaaacatatg gacaaagttcttttcttcaagatgggtaaattctatgagctttatgagatggatgcgcac gtaggagccaaggaacttgatttacggtacatgaagggagaacaacctcattgtggattt cctgagaagaacttctctgtaaacatcgagaaattagttcaaaagggctaccgggtttta gtggtggagcaaacagaaacacctgatcagctggagcgacgccgaaaagagaaaggctcc aaggataaagttgtgaagcgtgaaatatgtgcagttgttacaagaggcacgctgacagat ggggagatggtattaactaatccagatgcatcttatcttatggcgttgactgaaggagga gagagtttaactgacgagaaagcagagcacaattttggtgtatgtttggttgatgttgca acaaagaagatcatccttgggcagttcaaggatgatcaagattgcagtgcattgtcttgc gtgctctctgagataaggccggtggaagttattaaaccagctaatgcgctgagttctgca acagagagaacaatagttagacacaccagaaatcccttggtaaataatctggttccactt tctgaattctgggatgcagagaagaccatacatgaaattgggattctctacaagggattc agttgtcaaccgtcttctgcttattccggtgagggaaaagttctaggagatccacccctt aacaatgaaagtggttcaagctgcctaccaaaaatgttgtctgaattagcaaatggagat aaggacggtagcctggcactctctgctcttggtggtgccatttactacctgagacaagct ttcttggatgagagtctacttagatttgccaagtttgaatccctgccttactgtgatttc agcaactttactgtgaaacagcacatggttcttgatgctgctgctcttgaaaaccttgag atatttgaaaacagcagaaatggaggcgtttcgggaacgctgtatgcacaattgaaccaa tgtatcactgcgtctgggaaacggttgctgaaaacatggctggcaagacctttatataat ccagaactgatcaaggaacgtcaagatgctgtagcaattcttcggggggaaaatctccct tactcgctggaattccggaaggcgctgtcaagacttccagacatggagcggttgattgca cgtatcttttctagcattgaagctagtggaagaaatggagacaaagtggttctatatgag gatgtagcaaagaagcagctacaagagttcatatcaactctacgtggttgtgaaacaatg gtagaagcatgctcttcccttcgtgctagtttggagcatgataattccagacgcctgcgt catttacttactcctggtcaaagtcttccaaacatctcacccttcattaagtattttaag gatgcttttgactgggtagaagctcacgattctggacgtgtagtacctcatgaaggagct gatgaagaatacgattttacctgcaaaacggtaaaagaattggaagtcagtttgacgaaa catctgaaggagcaacgaaaattactcggagatgcatcgataaagtatgttactgttggg aaagacgaatatctcttggaagttcctgaaagtttaagtgggagtattcctcaggattac gaattatgctcatccaaaaagggtgtctttcgatattggactcctaccatcaagaaatta ttaaaagagctagcacaagcaaaatctgaaaaagagtctgctctaaaaagcatttcacaa agattgattggacgtttctgcgagcatcaagaagaatggagacaattggtttctgcaaca gccgagctagacgtgttgatcagcctcgcttttgcaagtgattcttacgaaggagtaaga tgccgtccagtaatatcaagttctaaatctgttgatgttccgcacttgtcagccactggt ctagggcatccagttctgaggggtgattcattaggcagaggctcttttgtaccaaatgat gtaaagattggtggggctaagcaggccagcttcatcctcctcacaggccctaatatgggt ggaaaatcaacccttcttcgccaagtttgcttggctgtgatcttgtctcagattggagca gatgtcccagcagaaacctttgagcttttgcctgttgacagaatatttgtccggatgggt gcaaaagatcatattatggcaggacaaagcacgtttttaacagaactatcagaaactgct gtaatgctgtcatcagcaactcgaaactcgctggtggtgctagatgagcttggacgagga acagccacatcagatggacaagccattgcggaatccgttcttgagcacttcatagacaaa gtgcagtgtagaggaatgttctctactcattatcatcgtctctctatggattatcaaacc aatccacaggtatcgctttgccatatgggatgtcaagtgggagaaggaagtggtggagtg gaagaagttacatttctctacagattgacgcctggtgcatgtcctaaaagctatggagtt aacgttgctcgcttagctggtcttccagatgatgtacttcagagagccgtgattaaatcc caagagttcgaaggcttatatggtaaaaaccataaaaaggctgatcgtaaaatggcagaa atgataaagcagatcatcagtggtgttgcatcagattctgatactgcaacttcaaagcac ttgctgtctgagctacactacaaggctaacacttatctccggctaaccaattga

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