Brassica rapa (field mustard): 103858827
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Entry
103858827 CDS
T03449
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103858827
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103858827
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103858827
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
103858827
NCBI-ProteinID:
XP_033143211
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Position
A03:complement(14980175..14984044)
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AA seq
705 aa
AA seq
DB search
MGFGRDSRVRFKEPSSTEFGYGRRARPSLNAVLDNVRRGFEKGSDKIRTFKRPLSFNSHK
NEEKRNATGTQKKNIINPQGSFLQNWNKIFLFASVIALAIDPLFFYIPIVDGKKHCLNLH
SSLEIAASVLRTFVDAFYIIHIVFQFRTAYVSPLSRVFGRGELVEDPKAIALKYISSYFI
IDVLSILPLPQLVVLAVIPNVDKPVSLLTKDYLITVIFAQYIPRILRIYPLYSEVTRTSG
IVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACGKRQGCELRDLYCDGN
NNVINDYLTTSCPFINPDDITNSTTFNFGIFTDALKSGIVKSDDFWKKFFYCFWWGLRNL
SALGQNLNTSKFVGEIIFAVLICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQ
WMAHRMLPEDLRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPL
FEIMDEQLLDAVCDKLRPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNA
VYLKASDFCGEDLLTWALDPQSSSHFPISPRTVQALTEVEAFALAAEDLKLVASQFRRLH
SKQLQHTFRFYSVQWRTWGASFIQAAWRRHCRRRLARSLTEEEDRFRIAVAKRERRAASS
PSLVATLYASRFASNALRNLRQHNNNTLPLLPPKPSEPDFSVDDD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggttttggccgtgacagtcgtgtaaggttcaaagaaccatcatccacagagtttggt
tacggaagaagagctagaccatctctaaacgcagtgttggacaatgttcgaagagggttt
gagaaaggatcagacaagatcaggactttcaagagacccttaagtttcaactcacataag
aacgaagagaagagaaatgctactggtacacagaagaagaacatcataaacccacaaggc
tcctttcttcagaactggaacaagatctttctcttcgcttctgtcatcgctttagccatt
gatcccttgtttttctacattcccattgttgatggaaaaaagcattgcctcaacttgcac
tctagcctcgagatagcagctagcgtgcttcgaacgtttgtagatgccttctacattatt
cacattgtgtttcagtttaggacagcttatgtctctcctttgtcccgagttttcggtaga
ggcgagttggttgaagatcctaaagccattgctttaaagtacatctcctcttacttcatc
atcgatgttctctctatccttccactcccacagcttgtagtcttggctgttatcccgaat
gtggacaaacctgtctctttgctcactaaggactacctgataactgtcatatttgctcag
tacattccaaggattcttcgtatttacccgctttacagtgaagttacaagaacatctggc
atagttactgaaacagcttgggctggtgctgcttggaacctctctctctacatgttagcc
agtcatgtgtttggagctttgtggtacttaatatctgtagaacgagaagacagatgctgg
cgtgaagcttgtgggaagagacaagggtgtgagttgagggatctctactgcgatggaaac
aacaatgttataaatgattacctgactacttcgtgtccgtttatcaaccctgatgatata
acgaattcaactactttcaactttggtatcttcactgatgctctcaagagtgggattgtt
aaatcagatgatttctggaagaagttcttctactgcttctggtggggtctgcgtaatcta
agtgcactgggacaaaacctcaacacgagcaagttcgttggtgaaatcatctttgctgta
ttaatatgcatatctggactagttttattcgcactacttataggcaacatgcagaaatac
ttggagtcgacaacagttcgagaagaggagatgagagtgaggaaaagagatgcagagcag
tggatggctcatcggatgttaccagaggacctgaggaaacgtatcagaaggtatgaacaa
tacaaatggcaagaaaccagaggagtcgaagaagaaaaccttctgcgtaacctccctaaa
gacctcagaagagacattaaacgccatttctgcctcgatctcctcaagaaagtacctctg
ttcgagataatggatgagcagctcctagatgccgtgtgtgacaagctaagaccagtgctc
tacacagagaacagctacgcaattagagaaggagacccagtggaggagatgttgtttgtt
atgagaggaaagcttatgagcgccaccacgaacggtggtcggacgggattcttcaatgcc
gtgtacctcaaagctagcgacttttgcggcgaggatcttctcacgtgggcgttggatcct
cagtcttcgtctcattttccaatctcgccgagaacagttcaagctctgactgaagtagaa
gcctttgctcttgcagcagaagatctcaagcttgtcgcctcgcagttcagacggctacat
agcaaacagcttcaacatactttcaggttttattcggtacaatggaggacatggggagcg
tcgtttatacaagcggcgtggcggagacattgtcggagaagactggctaggtcattaacg
gaggaagaagatcgattccgaatcgcggttgcaaaacgcgaacgcagagccgcgtcgtcg
ccgagccttgttgcgacgttatacgcgtcgcggttcgcgtcaaacgcgcttcgcaatctg
cggcagcacaacaataatacgctgcctttgcttcctccgaagccatcagagcctgacttc
agtgttgatgatgactga
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