Brassica rapa (field mustard): 103859036
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Entry
103859036 CDS
T03449
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103859036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103859036
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
103859036
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
PRIMA1
Motif
Other DBs
NCBI-GeneID:
103859036
NCBI-ProteinID:
XP_009134765
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Position
A03:15721553..15724667
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AA seq
389 aa
AA seq
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MLFQVGGDGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFYAALM
LILEGHSLRTTDASFAESLYGLRRKSVRLRLRKGSGEEEVQHSGLEKRQRILSVVFLVVL
PYFKSKLHAIYNKEREARLRESLWGMEDQGFDEADFFTGEEPVVSRGDSGNQELSVRVQL
ATKIKKFIAVCYPWIHASSEGLSFSYQLLYLLDATRFYSLGLQALGIQVCRATGQELMDT
SSRISKIRNHERERLRGPPWLKTVQGALLTCSYAVLDYAQTGLIAAVFIFKMMEWWYQSA
EERLTAPTVYPPPPPPPAPKVAKEGIPLPPDSSLCALCLQKRANPSVVTVSGFVFCYSCV
FKYVTKYKRCPVTLIPASVDQIRRLFHDT
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttcaggtgggaggcgatggcacacgccctaccttcttcgagatggctgcggct
cagcagcttccagctagcctccgcgccgctctcacatactcactcggcgtttttgcattg
agaagatcgtttcttcataaaatcttagactacgaggatgagttctatgctgctctgatg
cttatcctcgaagggcatagcttgcgaaccacagatgcttcgtttgctgaatcattgtat
ggtttgaggaggaagtcagtgagattgagattgaggaaaggttccggagaagaagaagtt
caacattctggtttagagaaacgccagagaatcctttctgttgtgtttctggttgtgtta
ccttatttcaaatcgaagcttcatgcgatatataacaaggagagggaagcgaggctaagg
gaaagtttatggggaatggaggatcaagggtttgatgaagctgacttcttcacaggagag
gaaccagttgtttcgagaggggatagtgggaatcaagagctttctgttcgagtgcagtta
gctacaaagattaaaaagtttatagctgtgtgctatccttggatacatgcatctagtgaa
ggattatcattcagttaccagctcttatatctactggacgctactagattctattctctc
ggccttcaagctcttgggatccaagtttgtcgagctacagggcaagaactgatggatacg
tcttcaagaatttcaaagatacggaaccatgaacgtgagagacttcgtggtcctccatgg
ttaaaaacagtgcaaggggctcttcttacctgttcatatgcggttctcgactacgcccaa
accggtttgattgcagccgtttttatctttaaaatgatggaatggtggtatcagtctgct
gaagaaagattgacagctccaactgtgtaccctccacctccacctcctccagccccaaag
gtggctaaagaaggaatccctctacctccagacagttctctctgcgcgttatgcttgcaa
aaacgtgcaaacccgtcagttgtcacagtctctggatttgttttctgctattcctgcgta
tttaagtatgttacaaagtacaagcgatgtccagtgacattgattccggcaagcgtggat
cagataaggaggctgtttcacgacacttag
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