Brassica rapa (field mustard): 103859044
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Entry
103859044 CDS
T03449
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103859044
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103859044
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103859044
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
103859044
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class I (G)
103859044
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103859044
Prokaryotic type
103859044
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
103859044
NCBI-ProteinID:
XP_009134772
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All DBs
Position
A03:complement(15779264..15782115)
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AA seq
402 aa
AA seq
DB search
MDVDKKDSVASDSSEQVVNPWEVAAKDGGKIDYDKLIDQFGCQRLDDSLIDRVQRLTSRQ
PHVFLRRGVFFAHRDFNEVLDAYERGDKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAF
KVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYK
NMVKVAKCVTLNKAMGIFGFSGEDHIGKLSFPPVQAVPSFPSSFPHLFPGKDKLRCLIPC
AIDQDPYFRMTRDVAPRLGYSKPALIESSFFPALQGENGKMSASDPNSAIYVTDTAKEIK
NKINRYAFSGGQDSIEKHREIGANLEVDIPVKYLSFFLDDDTELEHIKKEYGEGRMLTGE
VKKRLTEVLTEMVERHRMARAAVTDEMVDAFMAVRPLPSMFE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacaagaaggactcggtagcatccgattcatcggagcaagtggtgaatcca
tgggaagtcgccgccaaagacggcggcaaaatcgactacgacaagctcatagaccaattc
ggctgccagagactcgacgattcgctgatcgatcgcgttcagaggctcacttctcgtcag
ccccacgtcttcctccgccgcggcgtattcttcgcacacagggacttcaatgaggtgttg
gatgcttacgagagaggggataagttctatctctacactgggagaggaccttcttcagag
gctttgcatttagggcatttgattcctttcatgtttaccaaatacttgcaagaggcgttc
aaggttcctctggttatacagcttacggatgatgagaaatgcatgtggaagaacttgtcc
gttgaggaaagtcagagacttgctagagaaaatgctaaagatatcattgcttgtgggttt
gatgtcacaaagactttcattttctcagactttgactatgttggcggtgctttctataag
aacatggtgaaggttgcaaagtgtgtaacacttaataaggctatgggaatctttggcttt
tctggcgaagatcatattggaaaactcagcttccctcctgtgcaggcagttccatcattt
cctagctcattcccacacttgttccctggcaaggacaagctccgttgcttgatcccttgt
gcaattgaccaggatccttattttaggatgactcgcgatgttgcacctcggttaggctat
agcaagcctgcactgattgagtcatcatttttccctgctctgcagggagagaatggaaaa
atgtcagccagtgatcctaattcagcgatctatgtgactgacactgcaaaagaaataaaa
aacaagataaacaggtatgctttcagtggtgggcaagattccatcgaaaagcacagagaa
attggagcaaatctggaggtggatataccggtcaagtatcttagtttcttcctagacgat
gatactgaacttgaacacataaagaaggaatatggagaagggagaatgctaacgggagaa
gtaaagaagcgactcactgaagttttgacagagatggttgagagacaccgcatggctcga
gctgctgttactgatgagatggtggatgcgtttatggccgtgagacctcttccaagcatg
ttcgagtaa
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