Brassica rapa (field mustard): 103859060
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Entry
103859060 CDS
T03449
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103859060
Enzymes [BR:
brp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
103859060
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103859060
Prokaryotic type
103859060
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
DUF674
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
103859060
NCBI-ProteinID:
XP_009134787
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All DBs
Position
A03:complement(15823065..15827536)
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AA seq
697 aa
AA seq
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MKAMKLNKTVSSCLLRLLKPYSSSFHWTSTMAASAKTSEGMKTVDESDVGISCFISQLPG
FRGILKQRYADFIVNEVDMDGNVVRLTSLDVSPEMDVKEEDKTKSSDDVPQSYASAIESF
RSLCSASDAERMETLVNQVTSGADDEISPVVLDPSSDKSKRTAIHNFVKEKFKFLVTDTV
DGPDPTSKCIRVRVNSGNAGGKRSRKRKERGDKPFDSRGSEHWPADVGKFLKFHLYKENK
DTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGD
FSLVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSAESLGKDGFINYFGLQRFGSGSVP
THHVGAALLKGEWKEAVDMILDPRESERNVVNEAREYYKETGDIDGTLRQLPRYLVAERA
ILQCLKKCPGNYLQALKGVPRTLRMMYVHSYQSYLWNNATSLRVQKYGTNQVVLGDLVST
KVDDAKRVVGSLNSEQKENSEEALDCDQLDDTAVVDLPGERSDLFKVVGKEDVEAGTYST
SDIVLPLPGSRVIYPSNDVAEIFHDLAKKDGISLTESIHGVKEFSITSMTGGYRRVFQKP
IDFEWELLTYTDSNKPLAETDLDRITMEKPVDKVGSAEETESDSNQPESCETDLKDSEQT
QLALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaatgaaactaaacaaaactgtttcgtcttgtttgttgcgtctgctaaaaccc
tactcctcgagctttcactggacttcgacaatggcggcgtcagctaaaacctccgagggt
atgaagaccgtagatgaatccgacgtgggcatctcctgtttcatctcccagctccctggc
tttcgcgggattctcaaacaaagatacgcagactttattgtaaacgaagtggatatggat
ggcaatgttgttcgtttgacatcactggatgtctctcctgagatggatgtgaaggaggaa
gataaaacgaaaagttcagatgatgtaccacaaagctatgcttctgcaattgaatccttc
agatctctttgcagtgcctctgatgcagagcgtatggaaactttggttaatcaagtcact
tcaggagctgatgatgagatctcgccggttgttcttgatccaagttctgacaagtccaag
agaacggcgatccacaactttgttaaagaaaaattcaagtttctagtgaccgacacggta
gatggtccagatcctacttcgaaatgcatccgtgtgcgagttaattcaggaaacgctgga
ggtaaaagatcgagaaagcggaaggagagaggtgataagccgtttgatagcagaggttca
gagcattggccagcggatgttggcaagtttctcaagttccatctctacaaggagaacaaa
gatacacaagaggccttgggattgataggaaagatgcttggcgttcagccaaagtcgttc
ggattctctggaacaaaggataagcgatcagtctcaactcaacgtgtaactgtgttcaaa
cagcaagctagcaaattggctgcgcttaacaagagattgtttgggatcaaagttggtgac
ttcagccttgtaaaagagggccttctccttgggcagctgatgggaaacagatttacaatc
acattgagaggagtggttgcagattctgaagaaactatcaaaaagtctgcagaatccttg
ggcaaagatggcttcatcaactactttggcttgcagcgttttggaagtggttcagtacca
acccaccatgttggagccgcactactgaaaggagagtggaaagaagctgtagacatgatt
cttgatccaagagaaagtgaaagaaatgtagtaaacgaggcccgtgaatattacaaagaa
actggtgacattgacgggactctaaggcagctaccgcgatacctcgttgctgaaagagcc
attctgcagtgtctgaagaaatgtcctgggaactacctgcaggctctgaaaggcgtaccc
agaactttgagaatgatgtatgtacatagttatcaaagctacttatggaacaatgcaaca
agtctgcgcgtgcaaaaatacgggaccaaccaagttgtgttgggggacttggttagtaca
aaagtagatgatgcaaagagagtcgttggcagtttgaactctgaacagaaggaaaacagc
gaagaggcattggactgtgaccagttagatgatactgctgttgttgatcttccaggagaa
aggagtgacctctttaaggttgtaggtaaagaagacgtggaagctggaacttactctacc
agtgacatcgtcctccctctacctggctccagagttatttatccgtccaatgacgttgct
gaaatttttcatgatttggcaaagaaggacggtatcagcctaacagagagcattcacggt
gtaaaggaattctcaataactagcatgactggtggttatagacgtgttttccagaagcca
attgactttgaatgggagttactgacttacactgacagcaataaaccattggcagagacg
gacctggacaggataaccatggaaaagccagtggacaaagttggatccgctgaagaaact
gaatccgatagcaaccaaccagaatcatgtgaaaccgatttgaaagattccgagcagaca
cagttggctctcaaaatggctcttactcttccatcttcttgttatgcaacaatggcaatc
agagagctcttgaagacgtcaacttctgttgcatatcacaagacactaaactag
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