KEGG   Brassica rapa (field mustard): 103859075
Entry
103859075         CDS       T03449                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    103859075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:brp03400]
    103859075
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     103859075
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st RAWUL
Other DBs
NCBI-GeneID: 103859075
NCBI-ProteinID: XP_018513427
LinkDB
Position
A03:complement(15873409..15878555)
AA seq 754 aa
MHRVASSGSNGGSVRNRKEKKLTYVLNDANDSKHCAGVNCLDVLKSSVSSDRSYLFTGSR
DGTLKRWAFDEDASFCSATFESHVDWVNDAALAGESTLVSCSSDTTVKTWDSLSDGACTR
TFRQHTDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDAMEESSTNGLGN
SQPVTSLRNVGSSNNISVQSSPSHGYAPTIAKGHKESVYALAMNDAGTMLVSGGTEKVLR
VWDPRTGSKTMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTD
SVWALACTPSFTHVYSGGRDQSLYLTDLATRESVLMCTKEHPIQQLALQDDSIWVATIDS
SVERWPAEVQSPEKVFQRGGSFLAGNLSFNRARVSLEGLNPPPAYKVPLMTIPGSHPIVQ
HEILNNKRQILTKDAGDSVKLWDITKGVVVEDFGKISFEEKKEELFEMVSIPSWFTVDTR
LGCLSLHLETPQCFSAEMYSADLKVSGRPEDDKINLGRETLKGLLGHWMAKKKHKPKPQA
LTSGDILSVKDTKKNLIASKSEDSSAGNDPVYPPFEFPSVSPPSIITEGSQGGPWRKKIT
EFTGTEDEKDFPLWCLDAVLNNRLPPRENTKLSFFLHPCEGSNVQVVTLGKLSAPRILRV
HKVTNYVVEKMVLDSPLDSLAIDGASVSGGPQQLFAGNGLLTPGSKPWQKLRPSIEILCN
NQVLSPEWSLATVRTFVWKKPEDLILNYRVAIAK
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgcaccgggttgcaagttctgggagtaatggcggttctgtccgcaatcgcaaagagaag
aagcttacctatgtcttaaacgatgccaacgactcaaagcactgtgctggcgttaattgc
ttggatgtgttgaagtcgtctgtttccagtgatcggagctacctcttcactggaagtcgt
gatggtacactcaagagatgggcttttgatgaggatgcgtccttttgctcggctactttt
gagtctcatgttgattgggtgaatgacgctgctttggctggtgaaagcactcttgtttct
tgttcttcagacactactgtcaagacatgggacagcttatcagatggagcctgtacgagg
actttccgtcagcacacggactatgttacttgtctggcagttgcggcaaaaaataacaat
gttgttgcatctggtggccttggcggggaggttttcatatgggatatcgaagctgcttta
tcaccagttacgaaacctaatgatgcaatggaagaaagttctacaaatggtcttgggaac
tctcagcccgttaccagtttaagaaacgttggttcgagcaacaatatctctgtgcagtca
tcaccatcccatgggtacgcaccaacgattgctaaaggtcataaggagtcggtctatgcg
ttggcgatgaatgatgcagggacgatgctcgtctctggtggaacagagaaggttttgcgt
gtctgggaccctagaactggttcaaaaactatgaagctgaggggacacacagataatgtc
agagtgctgcttctggactcaactggcaggttttgcttgtctgggtcctctgattctatg
ataagactttgggatcttggtcagcagagatgtcttcatacctatgcggtgcacacagat
tctgtgtgggcgcttgcatgcactccatcatttactcatgtttatagcggtggaagagac
caatctctatacttgacagacttggcaactagagagagcgttttgatgtgtaccaaggaa
catccgatccagcaattagcgttgcaagatgatagtatatgggttgcaacaatagactcc
tctgtagagagatggcccgccgaagtacagagtcctgaaaaggtctttcaacgaggtggc
tctttcttggctgggaacttgtctttcaatagggcgagagtgtccttggaaggactaaat
ccaccccctgcctacaaggtgcctttaatgactattccagggagccacccgattgtgcag
cacgagattttgaataataaaaggcaaatcttaaccaaggacgcaggtgactcagtgaaa
ctatgggatataactaagggtgttgtggtagaggactttgggaagatatcatttgaagag
aagaaagaagaactgtttgaaatggtaagcattccatcatggtttactgtggatacacga
cttggatgcttatccttacatttggagactccacaatgcttctcggctgagatgtattca
gcagacctcaaagtttccgggcgacctgaagatgataagattaatctaggtcgtgaaaca
ctaaaaggcctgctgggtcattggatggcaaagaagaagcacaaaccaaaaccccaagct
cttacctctggagatattctatccgtaaaggataccaaaaagaatctgattgcatccaaa
agtgaagacagcagtgctgggaatgatccggtgtatcctccatttgagtttccttctgtc
tcccctccgtccatcatcactgagggctctcaaggaggtccatggagaaagaagataact
gagtttaccggaactgaagatgagaaggacttccccttgtggtgcttggacgccgtcttg
aacaatcgcctcccacctagagaaaatacaaaattaagcttcttcctgcatccatgcgaa
ggctcaaatgtgcaggtggtcacactagggaaacttagtgcaccccggatcttaagagtt
cacaaggttaccaattacgttgtggagaagatggtccttgacagtccgttggatagttta
gctattgatggagcaagcgtttcaggaggaccacagcaactgtttgcaggaaatggactg
ctaacgcctggatcaaagccttggcagaaactcagaccttccattgagatcttatgcaat
aaccaggtcttatctccagagtggagtttggcaactgtgcggacgtttgtatggaagaaa
cctgaggatctaatcctcaactacagggtggctatagctaaataa

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