Brassica rapa (field mustard): 103859080
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Entry
103859080 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103859080
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103859080
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
103859080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-Nse
zf-RING_16
zf-C3HC4_3
Prok-RING_1
RINGv
PHD_NSD
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
103859080
NCBI-ProteinID:
XP_009134812
LinkDB
All DBs
Position
A03:15886529..15887869
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AA seq
377 aa
AA seq
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MKRSDHATGVFKIVFLLILLAAELVAGQDNPDPRDERYNYGNLSPAMAVIVVILIAALFF
MGFFSIYFRHCSGAPDAGVSPAGGGRTRGNVTAAARGLDXFPTFVYSEVKTQKLGKGELE
CAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLEAHVTCPVCRANLAEQVAVEPDLELQE
VGVDPEPVVDASVPEQSVTNEVDSRRLPGVPVDVKRVKFSRSHTTGHSVVQPGECTERFT
LRLPEDVRKRMVENWKLNRSDSLTRGGSSRRGKPIDRSRAWSDRWLFRKTPSFLWRSRDD
GSIRLGATGSVRGNAVVNSTGDSVRSDRWAFLRNGSFLWRNSSVHVPRGGVNKDGEGTSV
KSTGAGGSTSGSVRIPV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatctgaccacgcgacgggcgtttttaaaattgttttcttgcttatattatta
gcggcggagcttgtggcgggtcaggacaaccctgatccgagagatgaaaggtataactac
ggtaacttaagtccagccatggcggtgatcgtcgtgatcctcatcgcagctctcttcttc
atgggcttcttctccatctacttccgccactgctccggcgcacccgacgccggagtttca
ccggctggtggtggaagaaccagaggaaacgtcaccgcggcggcgcgtgggctagacnng
tttcctacgtttgtctactcggaggtgaagacgcagaagctagggaaaggggagctggag
tgtgcgatctgtctgaacgagttcgaagacgacgaaacgctgcgtttgctgcctaaatgc
gatcacgtgtttcaccctcactgcatcggcgcctggcttgaggctcacgtgacttgtccc
gtttgcagagcgaatctcgccgagcaggtagctgtcgaaccggatcttgagttgcaggag
gtgggggtagatcctgaaccggtggttgatgcttctgtaccggaacaatcggttacgaat
gaagtcgattcgaggagattgccaggtgtaccggtggatgttaaacgagtcaagttctcg
agatcgcataccacggggcattcggtggttcaaccgggagaatgtaccgagcggtttact
ctccggttacctgaagatgtgaggaagaggatggtggagaattggaaactaaaccggtcg
gatagtcttactaggggagggagttcaagaagaggtaaaccgattgatcggtcaagggct
tggtctgatcgttggttgttccgtaaaacgccgtcgtttctgtggaggagtcgagatgat
ggttcgattaggctaggtgctaccggtagcgttagaggcaatgctgtggtgaattcaacc
ggtgattcggtacggtcagaccggtgggcttttcttagaaacgggtcgtttctgtggagg
aacagttcggtacatgtgccaagaggaggagtcaataaggacggcgaaggaacttcggtt
aagtcaaccggggcagggggatcaaccagtggttcggtgaggataccggtttag
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