Brassica rapa (field mustard): 103859320
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Entry
103859320 CDS
T03449
Name
(RefSeq) LIMR family protein At3g08930 isoform X2
KO
K14617
LMBR1 domain-containing protein 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
103859320
04980 Cobalamin transport and metabolism
103859320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103859320
Membrane trafficking [BR:
brp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
103859320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
Motif
Other DBs
NCBI-GeneID:
103859320
NCBI-ProteinID:
XP_009135079
UniProt:
M4CAV7
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All DBs
Position
A03:complement(16873553..16877086)
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AA seq
509 aa
AA seq
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MGDFNLALVIVAIVVCVIVFISSVYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILML
PADVANRHACRHAIYNGACNLTLPMKDLWLAVYIVDAILVFFVIPFAMFFYEGDQEKTMG
KRIKSALLWVVSTAVVCALVLGILYGVIGKVDFSVRHLASGTTSFPTSWQFSNNQPCIGN
TARQCSAFTASVASEKTWTMRTTFPEYVVALATIVGSVLFTIFGGVGIACLPLGLITAFI
RRPKAVITRSQYIKEATELGKKARELKKAADGLRQEEKGGAKGRAWRKNVKAVEKELLQL
EEDVNLLEEAYPQGEKAETAWAFTVLGYLAKFILGIIGLIVSIAWVAHIIIYLLVDPPLS
PFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIGF
VILAGLTFLYYIAFGWRRKKPSARFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaacctcgctctcgtgatcgtagcgatcgtcgtctgcgtcatcgtcttc
atctctagcgtctacctcctcgtcaactaccagcatccagacgatgcgaaccaggcgtat
ttccccaagttcgtcgtcgtcttcggcctctccattgccatgatctcgatcctcatgctg
ccggctgacgtggcgaatcggcacgcttgtaggcacgcgatttacaacggagcgtgtaat
ctgacgttgcctatgaaggatctttggcttgcggtttacattgttgacgctatcctcgtg
ttctttgttatccctttcgctatgtttttctatgaaggggaccaggagaagactatgggg
aaaaggattaaaagtgccttgctttgggtggtaagcacggctgttgtttgtgctctggtg
ctcggaatcttatacggtgttattggaaaggtggatttctctgtcaggcacttggcttct
ggcacgacctctttccctacttcctggcaattttcaaataatcaaccatgtattggtaac
accgcccgccagtgctcagcatttacagctagcgtcgcatctgagaaaacgtggaccatg
cgtactactttcccagaatacgttgttgctcttgctaccattgttggttcagttcttttc
acgatatttggtggcgttggtattgcctgcctaccattaggacttatcactgcattcatc
cggcgaccaaaggctgttatcactcgatcacaatatataaaggaagcaactgagctaggg
aaaaaggctagagaactaaagaaagcagccgatggacttcgtcaggaagaaaaaggtggt
gctaagggcagggcatggaggaaaaatgttaaagcagttgaaaaggagttgctccaattg
gaggaagatgtgaacctcttagaagaagcgtatcctcaaggagagaaggcagaaactgcc
tgggctttcactgtactaggatacttggccaagtttattcttggaatcataggattgatc
gtttctattgcatgggtggcacacatcatcatatatctacttgtcgaccctcctctttcc
ccttttcttaacgaggtttttattaagcttgatgacgtttggggtcttcttggcactgct
gcctttgctttcttctgtttctaccttctactcgctgttatcgctggggcaatgatgctg
ggtttgaagcttgtcttcatcaccattcatcccatgaaatggggagctactttaatgaac
tctttcctcttcaatgttggcctcattcttctttgttcaatcagtgtgattcaattctgc
gccactgcatttggatactacgctcaagccactgctgcccaggagatctttggccacacg
ttgcagtcactccgaggaatcaagtacctctacaagtacaacgtgttccaaatcgggttt
gttatcctggctggattgaccttcctgtactacattgctttcggatggagaagaaagaaa
cctagcgcccgtttccagctctcttcttaa
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