Brassica rapa (field mustard): 103859328
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Entry
103859328 CDS
T03449
Name
(RefSeq) regulatory-associated protein of TOR 1
KO
K07204
regulatory associated protein of mTOR
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103859328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103859328
Membrane trafficking [BR:
brp04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
103859328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
HEAT
Beta-prop_TEP1_2nd
EIF3I
HEAT_2
Beta-prop_DCAF4
HEAT_EZ
PEP5_VPS11_N
Beta-prop_EIPR1
Beta-prop_DCAF12
MFMR_assoc
Motif
Other DBs
NCBI-GeneID:
103859328
NCBI-ProteinID:
XP_009135087
LinkDB
All DBs
Position
A03:16892656..16900473
Genome browser
AA seq
1341 aa
AA seq
DB search
MALGDLMVSRFSQSSVSLASSHRYDDDCVSSSQGDSSRRKDSDATSSIYGNGTAERASAT
SMAYLPQTIVLRELRHDASEASALLGTSEGIVLAPKWRLKERMKTGCVALVLCLNITVDP
PDVIKISPCARIEAWIDPFSMAPPKALETIGQNLSTQYERWQPRARYKVQLDPTVDEVRK
LCLTCRKYAKTERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPISDLDSWLKTPSIY
VFDCSAARMILNAFAELHDWGSSGSSGSTRDCILLAACDVHETLPQSVEFPADVFTACLT
TPIKMALKWFCRRSLLKEIIDESLIDRIPGRQNDRKTLLGELNWIFTAVTDTIAWNVLPH
ELFQRLFRQDLLVASLFRNFLLAERIMRSANCNPISHPMLPPTHQHHMWDAWDMAAEICL
SHLPQLVLDPNAEFQPSPFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRA
LVLLGRFLDMGSWAVDLALSVGIFPYVLKLLQTTTNELRQILVFIWTKILALDKSCQIDL
VKDGGHTYFIRFLDSSGAFPEQRAMAAFVLAVIVDGHRRGQEACLEANLIGVCLGHLEAS
IPSDPQPEPLFLQWLCLCLGKLWEDFMEAQIMGREANAFQKLAPLVSEPQPEVRAAAVFA
LGTLVDIGFDSSKSVVDDEFDDDEKIRAEEAIIKSLLDVVSDGSPLVRAEVAVGLARFAF
GHKQHLKSAASSYCKPQSSSLLTSLPSIAKLHDAGNAKLVSLHMSPLTRASTDSQPVARE
AKISSSPLGSAGLMNGSPLSDDSSLHSDSGIMLDSVSNGAGHHQRLLDNAVYSQCIRAMF
ALARDPSPRIASLGRRVLSIIGIEQVVAKSSKPTGRLGEAATTSNTPLTGLARSSSWFDM
HAGNLPLSFRTPPVSPPRTNYLLRRVCSLEFKPHLLGSPDSGLADPPLGVSGSERSLLPL
STIYSWSCGHFSKPLLGGTDASQEIVTKREEKEKFALEHIAKCQHSSISKLSNNPIANWD
TRFETGTKTALLHPFSPIVVAADENERIRVWNYEEATLLNGFDNHDFPDKGISKLCLINE
LDDSFLLVASCDGSVRIWKNYATKGKQKLVTGFSSIQGHKPSARDLNAVVDWQQQSGYLY
ASGEVSTVALWDLEKEQLLRSIPSESECGVTALSASQVHGGQLAAGFADGSLRLYDIRSP
EPLVCATRPHQKVERVVGLSFQPGLDLAKVVSASQAGDIQFLDLRTTKDTYLTIDAHRGS
LTALAVHRHAPIIASGSAKQLIKVFSLQGEQLGIIRYYPSFMAQKIGSVSCLAFHPYQVL
LAAGAADSFVSVYTHDNSQAR
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggagacttaatggtatctcggttctcgcaatcctcagtttctctggcctcc
agtcaccgctacgacgacgactgtgtctcctccagtcaaggtgattcctcgcggaggaaa
gattccgatgctacgagtagtatctacggaaatggtacggcggagcgagcctccgctacc
agcatggcgtacttgccgcagactatcgtcctccgggagcttaggcacgacgcgtccgag
gcgtctgcgctcttggggacttccgaggggattgtgttggctcctaaatggcggcttaaa
gagcgaatgaaaacaggatgtgtagctctagttctgtgtttaaacattactgttgatccg
ccggatgttataaagatatctccttgtgcaagaatcgaggcttggatagacccattttcc
atggcgccgccaaaagctctcgagactattggacaaaacttgagcactcagtatgaaaga
tggcaaccaagggctcgatataaggttcagttagatccgacggtagacgaagtcaggaag
ctgtgcttgacttgtcggaaatatgcaaagaccgagagggttctattccattataatggg
catggtgtgccaaagcctacagctaatggggaaatttgggtattcaacaagagttatacg
cagtacattccattgccaatcagtgatcttgattcctggttgaagacaccgtccatctat
gtttttgactgctctgctgctaggatgattcttaatgcgtttgctgagcttcatgattgg
ggttcgtctggttcctctggatccacaagggattgtattctacttgctgcttgtgacgta
catgagacacttcctcagagcgttgaatttccagctgatgtttttactgcttgcctcacg
acacccattaaaatggcgttaaaatggttctgcaggcgttctcttctaaaagaaataatc
gatgaatcacttattgacagaattcccggccgccaaaatgaccgtaagacattgttaggg
gagttgaattggatcttcacagcagtgacggatacaattgcatggaatgtgcttcctcat
gaacttttccagagattattcagacaggatttgttggtcgctagccttttccgaaatttc
ttacttgctgagagaataatgcggtccgcaaattgtaatccaatatctcaccctatgcta
cctcctacgcatcaacatcatatgtgggatgcatgggatatggctgctgaaatctgcctt
tcgcaccttccccaacttgttctggacccaaacgcagagttccagccaagtccatttttt
actgagcaattaacagcttttgaggtgtggcttgatcatggatctgagcataagaagcca
ccggagcaattgcctattgttcttcaggtgttacttagccaatgccatcggtttcgtgct
cttgtacttcttggaagatttcttgatatgggttcatgggccgtggatctggctttgtct
gttggaatattcccatatgtgctgaagcttctgcaaacaacaacaaatgagctaagacag
atccttgttttcatatggacaaaaattctggcacttgataagtcatgtcaaattgacctt
gtgaaggatggggggcatacatacttcataagatttctagatagttcgggtgcatttcca
gaacaacgagctatggctgcttttgttctggctgtcatagtggacggacaccgacgaggc
caggaagcatgtcttgaagcaaatttgattggtgtttgtctggggcaccttgaagcatcg
ataccaagtgatccacagccagaaccattgtttttacaatggctttgtctttgtcttgga
aagttgtgggaagattttatggaggcccaaataatgggcagggaggcaaatgcttttcaa
aaattggcacctctggtttccgagccccaacctgaggtaagggctgctgctgtttttgcc
ctgggtaccttagttgatattgggtttgactctagtaaaagtgttgtggacgatgaattt
gatgatgatgaaaagattagagcagaagaagctatcattaaaagtctcttagatgttgtc
tcagatgggagtccacttgtccgggcagaggttgctgtaggtcttgcacgttttgccttc
ggccacaaacagcacctaaagtcagccgcatcttcatattgcaagcctcagtcaagttct
ttgcttacttcgctcccttcaatagctaaactccatgatgctgggaatgcaaaacttgtt
tctttacacatgagtcctctgactagagctagcactgatagccaaccagtggctcgtgag
gccaagatctcaagcagccctcttggctcggctgggctgatgaatggatctccattatct
gatgattcttcgttacattctgattctggaatcatgcttgacagtgtcagcaatggagct
ggccatcaccaaagactattggacaatgctgtttattcgcagtgcattcgagctatgttt
gccttagctagagacccatctccacgtattgcaagtctcgggcggcgtgtgctttctatc
attggaatcgaacaagttgttgcgaaatcctcgaagcccactggccgactaggggaagcc
gcaacgacatctaacactcctcttactggcctagctcgttcatcctcatggtttgatatg
catgcaggtaatctgcccttaagttttaggactcctccggtcagccctcctagaacaaac
tatctactgaggagagtttgttcgctagagttcaaacctcatctgttgggttcaccagac
tcaggattggctgatccgcctttaggcgtcagtggatctgaaaggagtttgctcccatta
tcaactatctacagctggagctgtggccacttttctaaaccgcttcttggtgggacggat
gctagtcaagagatagttaccaaaagagaagagaaagaaaaattcgcactcgagcatatt
gcaaaatgccagcactcctctattagcaagctcagcaataatcctattgccaactgggat
acgaggtttgaaacgggaacaaagacagctctccttcaccctttctctcctattgtagtt
gctgcggatgagaatgaacggatcagagtctggaactatgaggaagcaactcttctcaat
ggctttgacaatcatgattttcctgacaaaggaatttcaaagctctgcctcatcaatgaa
cttgacgactcttttctacttgttgcatcatgtgatggctcggtccgaatatggaaaaac
tatgcaacgaagggtaaacaaaagcttgttacggggttttcttcaattcagggccacaag
cccagtgcacgtgacttgaacgctgttgtggactggcaacaacagtctggctacctgtat
gcttctggggaggtgtcaacagtcgcactttgggacctggagaaagaacagcttctcaga
tctattccctctgagtcagagtgcggagttacagcactttcggcttctcaagtgcacggg
ggtcaacttgctgctggtttcgctgatggatctttgagactctatgatattcggtcacct
gaaccgcttgtctgtgcgactcggcctcatcagaaagttgaaagagtggttggactcagt
tttcagcctgggcttgatctcgcaaaggtggtgagtgcatcacaggccggtgacatacag
ttccttgacctcagaacaacaaaggacacatacctgacgattgatgcacacaggggttca
ctcacggccttagctgttcacagacacgctccaatcatcgcgagcggatctgcaaaacag
ctgattaaagtgtttagccttcagggagaacaactagggataatccgctactacccgtcc
ttcatggcacagaagatcggttcagtgagctgcctcgcttttcatccgtaccaggttctg
cttgcagctggagctgcggactcattcgtctctgtatacacccatgacaactcacaagca
aggtga
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integrated database retrieval system
