Brassica rapa (field mustard): 103859446
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Entry
103859446 CDS
T03449
Name
(RefSeq) probable inactive chitinase-like protein LaCIC isoform X1
KO
K20547
basic endochitinase B [EC:
3.2.1.14
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00520
Amino sugar and nucleotide sugar metabolism
brp01100
Metabolic pathways
brp04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
103859446
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
103859446
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
103859446
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Motif
Pfam:
Glyco_hydro_19
Chitin_bind_1
Motif
Other DBs
NCBI-GeneID:
103859446
NCBI-ProteinID:
XP_033144418
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Position
A03:complement(17418131..17420248)
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AA seq
400 aa
AA seq
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MKTYLLLLLIFSLLLSFSSGEQCGSQSIPEGALCPNGLCCSEAGWCGTTEAYCGHGCQSQ
CNPGPYPPPPTPQCGRQSIPAGALCPNGLCCSEAGWCGTTEAYCGHGCQSQCTPIPTPPA
PTPTPPTPTPPSPTPPGPTPPGPSGDLSGIISRDQFYKMLKHMNDNDCHAVGFFTYDAFI
TAAKSFPSFGNTGDLAMRKKEIAAFFGQTSHETTGGWSGAPDGANTWGYCYKEEIDKSDP
HCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPCGRDLGLELLKNPDVASSDPVIAFKTA
IWFWMTPQAPKPSCHDVITDKWEPSAADISAGRLPGYGVITNIINGGLECAGRDVAKVQD
RISFYTRYCGMFGVDPGSNIDCDNQRPFNEGSNVFLDAAI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttatctccttctccttctcatcttctcacttctcttatcattttcctccggt
gagcaatgcggtagtcaatccatacccgagggagcactctgccccaacggtctatgctgc
agcgaggctggatggtgcggcaccaccgaagcttactgcgggcatggttgtcaaagccag
tgcaatcctggtccctatcctcctcctccaaccccgcagtgtggtcgtcaatccataccc
gcgggagccctctgccccaacggtctatgctgtagcgaggctggatggtgcggcaccacc
gaagcttactgcgggcatggttgccaaagccagtgcactcccattcccactcctcctgct
cccactcccactcctcctactcccactcctcctagtcctacccctcctggtcccactcct
cctggtcccagcggggatctttctggcatcatttcaagagatcagttctataaaatgctt
aagcacatgaacgacaatgattgtcatgctgttggtttcttcacttacgacgccttcatc
accgccgctaagtctttcccaagtttcgggaacaccggagaccttgccatgaggaagaag
gagatagcagccttcttcggccagacttcccacgaaaccaccggtgggtggtcgggtgca
cccgatggagcaaatacatggggctactgttacaaggaagaaattgacaaaagcgatccc
cactgtgatagcaacaacctcgagtggccatgcgcaccaggcaaattttactacggacga
ggaccaatgatgctgtcttggaactataattacggaccgtgcgggagagacctaggactc
gagttactcaagaacccagatgttgcgtccagcgacccagtgatagctttcaaaaccgcc
atttggttctggatgactcctcaagctcctaaaccctcgtgccacgacgtaatcaccgac
aagtgggagccgtcggccgccgacatttcagccggaaggttaccaggttatggagtgatt
acgaatatcattaacggtggattagagtgtgctggtcgcgacgtcgcaaaggtccaagat
cggatatcgttttatacaaggtactgtggcatgtttggtgttgatcctggaagtaatatt
gactgtgacaatcaaaggccgtttaatgaaggtagtaacgttttcttggacgctgctatc
taa
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