Brassica rapa (field mustard): 103859519
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Entry
103859519 CDS
T03449
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103859519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103859519
03110 Chaperones and folding catalysts [BR:
brp03110
]
103859519
03029 Mitochondrial biogenesis [BR:
brp03029
]
103859519
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103859519
Enzymes [BR:
brp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103859519
Messenger RNA biogenesis [BR:
brp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103859519
Chaperones and folding catalysts [BR:
brp03110
]
Heat shock proteins
HSP60 / Chaperonin
103859519
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103859519
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103859519
Exosomal proteins of other body fluids (saliva and urine)
103859519
Exosomal proteins of breast cancer cells
103859519
Exosomal proteins of colorectal cancer cells
103859519
Exosomal proteins of bladder cancer cells
103859519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
103859519
NCBI-ProteinID:
XP_009135307
UniProt:
M4CBC7
LinkDB
All DBs
Position
A03:17737101..17746043
Genome browser
AA seq
590 aa
AA seq
DB search
MASTFTATSSLGSLIAPNALKFPSSTFGKRQNVCSRRTHPAIVCAAKELHFNKDGSTIKK
LQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIGAKLVR
QAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVHELKLMS
KEVEDSELADVAAVSAGNNPEVGNMIAEAMSKVGRKGVVTLEEGKSAENHLYVVEGMQFD
RGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILIIAEDIEQ
EALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEV
LGNASKVVLTKEMTTIVGDGSTQEAVNKRVVQIKNLIEQAEQEYEKEKLNERIAKLSGGV
AVIQVGAQTETELKEKKLRVEDALNATKAAVAEGIVVGGGCTLLRLAAKVDAIKDTLEND
EEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYEDLMVAGI
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgactttcactgctacgtcttcacttggctccttgattgctcccaatgccctc
aagtttccttcaagcacatttggaaagagacagaatgtgtgctcaagaagaacccatcct
gccattgtttgtgcagccaaggagttgcatttcaacaaggatggttctaccataaagaaa
cttcaaaccggtgttaacaagctagccgaccttgtcggtgtcacacttggaccaaaaggg
agaaacgttgtccttgagagcaagtatggatctccaaaaattgttaatgatggtgtcacc
gttgctagggaggtggagttggaggacccggttgagaacattggtgcaaagcttgtaagg
caagcagctgcaaagaccaatgacttggctggtgacggtacaacaacatccgttgttctt
gcacaaggttttattgctgagggtgtcaaggtggtggctgcaggtgcaaaccctgtattg
atcaccagaggcattgagaagacagcaaaggctttggttcacgagctgaagctaatgtcc
aaggaggttgaagacagtgaacttgcggatgtggcagccgttagtgctggtaacaaccct
gaagttggaaacatgattgctgaagcaatgagcaaagtgggcaggaaaggtgtggtaaca
cttgaggagggtaaaagcgctgagaaccacctttacgtggtggaaggcatgcaatttgat
cgtggttatatctccccatacttcgttacagacagtgagaaaatgtctgtcgagtatgat
aattgcaagttgcttcttgttgacaagaaggttaccaatgcaagggaccttgttggtgtt
ctagaggatgccattagaggaggatacccaatactgataattgcagaagatattgaacaa
gaagctttggctactcttgttgttaacaagcttagaggcacgttgaagatagcagctctc
aaagctcctggatttggagagcgcaagagccagtaccttgatgatattgccattctaact
ggagcaactgtgataagagaggaagttggtctttctcttgacaaagctgggaaagaggtt
ttgggtaacgcctctaaggttgttctcaccaaggagatgacgaccattgtgggtgatggt
agcacacaggaggcagtgaacaagcgtgttgtacagattaagaatcttattgagcaagcg
gagcaagagtatgagaaggaaaaattgaatgagagaattgcaaagctttctggtggagtt
gctgtaattcaagttggcgcacaaactgagacagagctcaaagaaaagaagctaagagtt
gaagatgctcttaacgctacaaaggctgcggttgcggaaggtattgttgttggtggtggt
tgcactttacttcgtcttgcagccaaggttgatgccatcaaggatacccttgaaaacgat
gaagaaaaggtaggagcagagatcgttaaaagagccttgagttaccctctgaagttgata
gcaaagaatgctggtgtcaacggaagcgttgtcagtgagaaggtgctagctaacgataac
gtgaagttcggatataatgctgcaactgggaagtatgaagatctgatggttgcaggaatc
atcgaccccacaaaggttgtgagatgctgtctggaacatgccgcctcggttgcaaaaacg
ttcttgatgtctgactgtgtggttgttgagatcaaggagccagagccagttcctgctggc
aacccaatggacaattccggatatggatactga
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