Brassica rapa (field mustard): 103859537
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Entry
103859537 CDS
T03449
Name
(RefSeq) protein indeterminate-domain 11 isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103859537
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103859537
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
PFF1_TM
zf-C2H2_4
Presenilin
Motif
Other DBs
NCBI-GeneID:
103859537
NCBI-ProteinID:
XP_009135328
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Position
A03:17834364..17842069
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AA seq
571 aa
AA seq
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MYMSNLLFCLRVFISICLYVSIYIDLNFFFLFFLLSVLLMMSKDILLHQQVQQQQQEENM
SNLTSASGDQTSVSSGNRTEASGSNYFPHHQQQQQQQQQQQQFFVPESQPQKKRRNQPGN
PDPESEVIALSPKTLMARNRFVCEICNKGFQRDQNLQLHKRGHNLPWKLKQRSNKEVIRK
KVYVCPEASCVHHDPTRALGDLTGIKKHFCRKHGDKKWKCDKCSKKYAVQSDCKAHSKTC
GTKEYRCDCGTIFSRRDSFTTHRAFCEALAKETAREVVIPQEQNHQPNPILVHQSTFHHQ
HHHQAQPNMNFSSSSPSSHNIINTLHFEINNNGTNNSNTSSNHLHTFSVKKEQQQSNDHI
INYHHQNIPPWLAPQDLTFSNPNPNNGGGGLFSLAASPAMSATALLQKAAQMGSKKTPPL
PPTTDFERSAHHNTLTTTMAAMMTSPSGYISSNNNNQVLFQGYNASDFDHHGGEEAFDDT
FSAFLRTNADTTTAGSDKKKSGGGGGVGEGLTRDFLGIRPLMSHNEILSIAGLGNCISGA
ASNQLHPKPWQGTQVGSTKDRDASRFAWWHV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgtctaatcttctcttttgtctccgtgtttttatcagtatatgtctatatgtg
tccatatatatagatctgaattttttttttctattttttcttctcagtgttttattgatg
atgagcaaagatatcttacttcatcagcaagtacaacaacaacaacaagaggagaatatg
tcgaatttaacttcagcatctggggatcaaacaagtgtctcttcaggaaacagaactgaa
gcaagtggttctaattacttccctcatcatcaacaacaacaacaacaacaacaacaacaa
caacagttctttgttcctgaatctcagcctcagaagaagaggaggaaccaaccaggaaat
ccagacccagaatcagaagtgattgctttatcaccaaagacactaatggcaagaaacaga
ttcgtgtgtgagatctgcaacaaaggattccaaagagaccagaatctacagcttcacaag
agaggtcacaatctgccatggaagctgaaacaacgatccaacaaagaagtgataaggaag
aaagtgtatgtttgtccagaagcaagctgtgtccaccatgacccaactcgagctctaggt
gacttaaccggaatcaagaagcatttctgtagaaagcatggagacaaaaagtggaaatgt
gacaaatgctcaaagaaatatgctgttcagtcagattgtaaggctcattctaagacttgt
ggcaccaaagaatacagatgtgactgtggcactatcttttctaggagggatagtttcaca
actcatagagcattttgtgaagcattggcaaaagagactgcaagagaagtagtaatacca
caagaacagaatcatcaaccaaaccctattttagttcaccaatctacttttcatcatcaa
catcatcatcaagcacaaccaaacatgaacttctcttcctcgtctccctcttcccacaac
atcatcaatacccttcacttcgagatcaacaacaatggtactaacaatagtaacactagt
agtaaccatctccatacattttcagtgaagaaagagcaacaacaaagcaatgatcatatc
atcaattaccaccatcaaaacatccctccttggcttgcgcctcaagatctcacattttca
aaccctaaccctaataatgggggaggaggtttgttctctcttgcagcttctccagccatg
tcagccaccgcattgctccagaaagcagcccaaatgggttccaaaaagacacctcctcta
ccaccaaccactgacttcgaaaggtcagctcatcataacaccctcaccacgacaatggcg
gcaatgatgacgtcaccttctggatacatcagctccaacaacaacaatcaagttttgttt
caaggttacaatgcctccgattttgatcaccacggtggagaagaagccttcgacgacacg
ttcagcgcgttcttgaggacaaatgctgatactacaaccgcaggatcagacaagaagaaa
agcggtggaggaggtggagtaggagaaggtttgactagagacttcttggggataagaccg
ttaatgtctcataacgagattctaagtattgccggtctcgggaattgcatcagtggtgct
gcttctaatcagcttcatccaaagccttggcagggcacacaagtgggatcaacaaaagat
agggacgcatcacgttttgcttggtggcatgtataa
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