Brassica rapa (field mustard): 103859552
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Entry
103859552 CDS
T03449
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103859552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103859552
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103859552
mRNA degradation factors
5'-3' decay
Lsm complex
103859552
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
103859552
NCBI-ProteinID:
XP_009135355
UniProt:
A0A398A2E5
A0A398A4I7
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All DBs
Position
A03:complement(17897360..17898968)
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AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDRKILVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ
YCDIPLGLYVIRGENVVLIGEMDTEREELPPHMIRVSETEIKRAQKVEREAGELRGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctggtcctgaagatatttatctttctacttcactcgctagttatctcgat
agaaaaatacttgtgctccttagagatggtagaaagcttatgggaactctccgttctttt
gatcaattcgccaatgcggttctagaaggtgcgtgcgagagggtcattgtaggtgagcaa
tactgcgacattcctttaggcctctatgtaatccgtggagagaatgttgttctgattggt
gagatggacacagagagagaggagcttcctccacacatgattcgcgtctcagagacagag
ataaaaagggcgcaaaaagtggagagggaagcgggtgagctgagaggaacaatgaggaag
agaatggagtttcttgactttgattaa
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