KEGG   Brassica rapa (field mustard): 103859552
Entry
103859552         CDS       T03449                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103859552
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103859552
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103859552
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103859552
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 103859552
NCBI-ProteinID: XP_009135355
UniProt: A0A398A2E5 A0A398A4I7
LinkDB
Position
A03:complement(17897360..17898968)
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDRKILVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ
YCDIPLGLYVIRGENVVLIGEMDTEREELPPHMIRVSETEIKRAQKVEREAGELRGTMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggctggtcctgaagatatttatctttctacttcactcgctagttatctcgat
agaaaaatacttgtgctccttagagatggtagaaagcttatgggaactctccgttctttt
gatcaattcgccaatgcggttctagaaggtgcgtgcgagagggtcattgtaggtgagcaa
tactgcgacattcctttaggcctctatgtaatccgtggagagaatgttgttctgattggt
gagatggacacagagagagaggagcttcctccacacatgattcgcgtctcagagacagag
ataaaaagggcgcaaaaagtggagagggaagcgggtgagctgagaggaacaatgaggaag
agaatggagtttcttgactttgattaa

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