Brassica rapa (field mustard): 103859579
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Entry
103859579 CDS
T03449
Name
(RefSeq) putative geranylgeranyl pyrophosphate synthase 8, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00900
Terpenoid backbone biosynthesis
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
Module
brp_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103859579
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
brp01006
]
103859579
Enzymes [BR:
brp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
103859579
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
103859579
2.5.1.29 geranylgeranyl diphosphate synthase
103859579
Prenyltransferases [BR:
brp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
103859579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
103859579
NCBI-ProteinID:
XP_009135387
UniProt:
A0A398A8F9
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Position
A03:complement(18041154..18042633)
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AA seq
358 aa
AA seq
DB search
MNTVNLSFSFLFIQSKGRRYNSISSVKSPPKRTVLSLSSAVTSRSGDMITPEGKRNDHSS
TFDFKSYMIGKAESVNAALDVSLPLLKPLTIQEAVRYSLLAGGKRVRSLLCIAACELVGG
DEAIAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEAMAVLAGDALLSLA
FEHMTVMSSGLIAPERMIHAVIELAKAIGTKGLVAGQVVDLRSQGLNPDDVGLDRLEFIH
LHKTAALLEAATVIGAIMGGGTEEEIDKLRKYARCIGLLFQVVDDILDVTKSSEELGKNA
GQDVITGKVTYPRLIGLEKSRELAEKLSREAEEQLLGFDSDKAAPLVALASYIACRNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgtgaatctcagcttctccttcctcttcatccaatccaaaggaagacgatac
aactccatatcctccgtcaagagtcccccaaaacgcactgttttatctctctcgtccgct
gtcacctcacgaagcggagacatgattacaccagaagggaaacgcaatgatcacagctcc
acctttgacttcaagtcgtatatgatcggtaaagccgaatctgtaaacgcggctctcgat
gtttccttaccgcttttgaaacctctaacgatccaagaggcggtgcggtactcactgcta
gctggcggaaaacgtgtgagatctctgctctgcattgctgcatgtgagcttgtgggtggc
gacgaggctattgccatgtcagccgcttgtgcggtcgagatgatccacacgagctctctt
atccatgacgaccttccatgcatggacaatgctgacctccgcagaggcaagcctaccaac
cacaaggtatttggagaagctatggcggttttggcaggtgatgcactcctttctttggcg
tttgagcatatgaccgtcatgtcgagtgggttgatcgccccagagaggatgatccatgct
gtgattgagcttgcaaaggccattgggacaaaagggctagtggctgggcaagtggttgac
ctacgaagccaagggttgaatccggacgacgtcggattggaccgcctagagttcattcac
ctccacaaaacagcggctttgttggaggcagcgacggttataggagccataatgggaggt
ggcacagaggaagagatcgacaagcttagaaagtatgccagatgcattggccttttgttt
caagtggttgatgatattcttgacgtgacgaaatcttccgaggaattgggtaagaacgcc
ggacaagacgttatcaccggaaaagtgacgtatccgaggctgattggtttggagaaatcg
agggaacttgcggagaaattgagcagagaagcagaggaacagcttctagggtttgattct
gataaggcggctcctctagtggctctggctagctacattgcatgtagaaacaattga
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