Brassica rapa (field mustard): 103859709
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Entry
103859709 CDS
T03449
Name
(RefSeq) novel plant SNARE 13
KO
K08494
novel plant SNARE
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103859709
Membrane trafficking [BR:
brp04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
103859709
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
MCPsignal
TMPIT
Helo_like_N
YkyA
Occludin_ELL
GCIP_C
Vps53_N
Motif
Other DBs
NCBI-GeneID:
103859709
NCBI-ProteinID:
XP_009135530
UniProt:
M4CBT3
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Position
A03:complement(18753903..18756396)
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AA seq
271 aa
AA seq
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MASNIPMSPQLEQIHGEIRDHFRALANGFQKLDKIKDSSRQSKQMEELTDKMRECKRLVK
EFDRELKDEEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGV
SGEPTPEDNVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAATLKGQ
TDQMGRVVNHLDTIQFSIKKASQLVKEIGRQVATDKCIMMFLFLIVCGVVAIIIVKIVHP
NNKDIRDIPGLAPPAQSRKLLYLRNQEYMGK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatatcccgatgagtcctcaattggagcagatccatggtgaaatccgtgac
catttccgagccctcgcgaatggtttccagaagttggataagatcaaggattcatctaga
caaagcaagcagatggaggaacttactgacaagatgagagaatgtaaaaggctggtgaag
gagttcgaccgtgagctcaaggatgaggaagctagaaattctcctcaagtaaataagcaa
ttgaacgatgagaaacaatccatgatcaaggaactcaactcttacgttgcactaaggaaa
acgtatatgagtacacttggaaacaagaaagtcgaactatttgatatgggagctggagtc
agtggcgagcccacacctgaagataatgttcaagtggcttcatctatgtcaaaccaggag
ctagttgatgctggaatgaaaagaatggatgagactgatcaagccattgagcgctcaaaa
caagtggtggagcaaacactcgaagttggaactcaaactgcagctactttaaagggacag
acggatcaaatgggacgagtggtaaaccacttggacacgattcagttctctatcaagaag
gcttcccagctagtgaaagagataggaagacaggtggctactgataaatgcataatgatg
ttcctctttctcattgtatgcggcgttgtagccattatcatagtgaagattgtacacccg
aataacaaagacataagggacataccaggattagctcctccagcacaatcaaggaagctt
ttgtacttgaggaatcaagaatatatgggaaaatag
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