Brassica rapa (field mustard): 103860242
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Entry
103860242 CDS
T03449
Name
(RefSeq) heat stress transcription factor C-1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103860242
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
103860242
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GFIT
Motif
Pfam:
HSF_DNA-bind
LCD1
E2F_CC-MB
DivIC
FliD_C
UPF0242
DUF7307
Motif
Other DBs
NCBI-GeneID:
103860242
NCBI-ProteinID:
XP_009136076
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Position
A03:20658416..20660015
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AA seq
307 aa
AA seq
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MEEDKNNNTTSTNTNVIAPFVAKTYQMVNDPSTDWLITWGPAHNSFVVADPLDFSQRILP
AYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLKNIARRKHARGMMDVED
GEIVKEIERLRDEQRELELEIQRMNQRIEATEKRPEQMMAFLYKVVDDPDLLPRMMLEKE
RLVSDKKKRRVTVKSEEGAEEEERVFGVVSPSPSPPENSIGWVVPMQRQGTFGSYYNETG
MVANSMRSTSSKSSSLTSTLSLPESVNGGCGSVQGETRDKEAATFGGVVESNPQTPPYPF
SLFRGGF
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacaaaaacaataacactacgagcacgaacacaaacgtgatcgcaccattc
gttgccaaaacatatcagatggtcaacgatccttcgaccgattggctcatcacctgggga
cctgcccacaacagcttcgtcgtcgctgaccctctcgacttctctcaacgcatcttgcct
gcttatttcaaacacaacaacttcagcagcttcgttcgtcagctcaacacctacggtttc
aggaaagtggatcctgaccggtgggagttcgcgaacgagcatttcctcagaggtcagaag
cacctgctcaagaacatagcgcgtaggaaacacgcgcgtgggatgatggatgtggaggac
ggcgagatcgtgaaggagatcgagcggctgagagacgagcagagggagcttgagctggag
attcagaggatgaaccaaaggatcgaggcgacggagaagaggccggagcagatgatggcg
tttctctacaaggtcgttgatgatcccgacctcctcccgaggatgatgctcgagaaggag
cgattggtctccgacaagaagaagcgtcgtgtcacggtgaagtcagaggaaggggcagag
gaggaggagagggtctttggtgtggtttcaccgtcgccttccccgccggagaattcaata
ggatgggttgttcccatgcagaggcaggggacgtttggtagttactacaacgagacgggt
atggtggcgaactcgatgaggtccacttcgtcgaagtcatcatcgttgacgtcgacgttg
tcgttgccggagagcgtaaacggaggatgtgggagtgttcagggggagacaagggacaaa
gaagcggcgacgtttggaggagtggtggagtcaaatccacaaacaccgccttatccgttt
tctttatttcgaggtggcttttag
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