Brassica rapa (field mustard): 103860316
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Entry
103860316 CDS
T03449
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103860316
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103860316
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103860316
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
103860316
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
103860316
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103860316
Prokaryotic type
103860316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
RPA_interact_M
Motif
Other DBs
NCBI-GeneID:
103860316
NCBI-ProteinID:
XP_009136151
UniProt:
M4D9N3
LinkDB
All DBs
Position
A03:complement(21003752..21006847)
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AA seq
652 aa
AA seq
DB search
MASSRSLLLSSSFLSRPSSFTSSLRRFAYLPSPTPRFSPKRHGFSTVLSVATEPAAISST
APKKSEPATVPLPSNDSSDKLLKIRHTCAHVMAMAVQKLFPDAKVTIGPWIDNGFYYDFD
MEPLTDKDLKRIKKEMDRIISRNLPLLREEVSREEAQRRIMAINEPYKMEILESIKEEPI
TVYHIGNEWWDLCAGPHVETTGKINKKAVELESVAGAYWRGDEKRQMLQRIYGTAWESEE
QLKAYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPKGAIVRNIIEESWKKMHV
EHGYDLIYTPHVAKADLWRISGHLDFYRENMYDQMEIEDELYQLRPMNCPYHILLYQRKR
QSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTE
EILSRFGFDKYEVNLSTRPEKSVGSDDIWEKATCALKDALDDKGWSYEVDEGGGAFYGPK
IDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDTNSDKKRPIMIHRAVLGSLERFFGVL
IEHYAGDFPLWLSPVQVRVLPVTDNQLEFCKEVSKKLKACGVRAELCHGERLPKLIRNAE
TQKIPLMAVVGPKEVETGTVTVRSRFGGELGTIPVDDFINKINIAVETRTAL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctctcgttctcttctcctctcctcttccttcctctccagaccctcttccttc
acttcctctctaagacgcttcgcttaccttccatctcccacccccagattctctccaaaa
cgtcatggtttctccaccgtcctctccgtcgccaccgagccagcagctatctccagcacc
gcccccaagaagtcagagccagcgaccgtcccgcttcccagtaacgactcatccgataag
ctcctcaaaattcgtcacacgtgtgcacatgtaatggccatggcagttcagaaactcttc
cctgatgctaaagtaaccataggtccctggatcgacaacggtttctactacgatttcgac
atggagcctctgacagacaaagacctcaagaggatcaagaaagagatggatcgtatcatt
agccggaacttaccacttctacgagaagaagtatctagagaagaagcgcagagaaggatc
atggccatcaacgagccttacaagatggagattctcgagagtatcaaagaagagcccatc
accgtttaccatataggtaacgaatggtgggatctttgcgctggacctcacgtcgaaacc
acagggaagatcaacaagaaagccgtcgagctagaatccgtcgccggcgcgtactggaga
ggggacgagaagaggcaaatgcttcagaggatctacgggacggcttgggagagcgaagag
cagcttaaagcctatctccacttcaaggaggaagctaaacgcagagaccacagacgcatt
ggtcaagacctcgacctgttctcgatccaggacgaagctggaggagggttagtgttctgg
catcccaaaggcgccatcgttagaaacataatcgaggagtcgtggaagaagatgcacgtc
gaacacggttatgatctgatctacactcctcacgttgctaaagctgatctctggaggatc
agtggtcacttggacttctacagagagaacatgtacgatcagatggagatcgaggacgag
ctttatcagctaaggcccatgaattgtccttaccacatcttgctttaccaaagaaaacgt
cagtcatatcgagatttacccataagagttgcggagcttggtacagtttacagatacgag
ttgtctggtagcttgcacggtctcttccgtgtcagagggttcacacaggacgatgcgcat
atattttgtttagaggatcagatcaaagatgagatcagaggtgtgttggatctcacggaa
gagatattatcgaggtttgggttcgataagtatgaggtgaacttatcaaccagacctgaa
aaatcagtggggagtgatgatatatgggagaaggcaacgtgtgctcttaaggatgcgttg
gatgataagggatggagctatgaggttgatgaaggaggtggtgctttttatggaccaaag
attgatcttaagatcgaagatgcattgggaagaaaatggcagtgctcaaccatacaggtt
gactttaatcttcctcagaggtttgacattacttatgtggacacaaactcggataagaaa
cgccctataatgatccacagggcggttttggggtccttagaaagattttttggggttctc
attgaacattacgctggggattttccattatggctctctcctgttcaagttcgggttctg
cccgtcacagacaatcagttggagttctgcaaggaagtgagtaagaagctgaaagcttgt
ggagtaagggctgagctgtgccatggagagaggttgccaaagctcataaggaacgcagag
acacagaagatcccattaatggcggttgtgggccctaaggaagtcgagaccggaactgtc
accgttaggtcgaggtttggaggagagcttggaaccattcctgttgatgacttcatcaac
aaaatcaacattgcagtggaaacaagaactgctttgtaa
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