KEGG   Brassica rapa (field mustard): 103860413
Entry
103860413         CDS       T03449                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:brp03016]
    103860413
Enzymes [BR:brp01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     103860413
Transfer RNA biogenesis [BR:brp03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    103860413
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4
Other DBs
NCBI-GeneID: 103860413
NCBI-ProteinID: XP_009136626
UniProt: M4D5Y0
LinkDB
Position
A01:complement(95053..98163)
AA seq 649 aa
MSDVVAELAEGDAKPTKQFSVYEATSEELIERSMAPIKKEFLCPPPSRSLKQSDVKAPHP
SLVQEKKSKRQLKRERREKCAINLCPQVSRTEDVDSCQYKEKCRFNHDIQAFKAQKPDDI
EGQCPFVASGIKCQYGLSCRFFGTHKDLSGISDAEINFFNKETQRLLWKNNMTFPKADAK
LKSLGLMGHAKKSNVPQENDAEKPLDGAQTNEDVDIPGPLETEDVRPTKKAKSDETSKLG
DIIDGVMNVDDETEKTGHSTSKAKIEDEEDSIKVVETDGSLKSHPREKKKLIDFRDKLYL
APLTTVGNLPFRRLCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGS
FPDTVSRAVELIDRECTVDFIDINMGCPIDMVVNKSAGSALLNKPLRMKNIVEVSSSIVE
TPITIKVRTAFFEGKNRIDSLISDIGDWGATAVTIHGRSRQQRYSKSADWDYIYQCTKNA
SSNLQVIGNGDVYSFLDWNKHKSDCPELSSCMIARGALIKPWIFTEIKEQRHWDITSGER
LNIFKDFVRFGLQHWGSDTKGVETTRHFLLEWLSYTFRYIPVGLLDVIPQQINWRPPSYF
GRDDLETLMMSESAGDWVRISELLLGKVPEGFTFAPKHKSNAYDRAENG
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgtccgatgtagtagctgagctggcggaaggagatgcaaagccgacgaagcagttcagt
gtgtacgaagcgacatcggaggagcttatagaacggtcgatggcgcctataaaaaaggag
ttcctatgtcctcctccgagccgttccctaaagcaaagtgacgtgaaggcgcctcatccg
agcttagtccaggagaagaaatcgaaacgacagctcaaaagagaacgccgggagaaatgt
gcgataaacctgtgtccgcaggtttcgagaacagaagacgttgattcctgtcagtataaa
gagaaatgccgctttaatcatgacattcaagctttcaaagctcagaaaccagatgatata
gaggggcagtgcccatttgtggcctctgggatcaagtgtcaatatggtttatcatgcaga
ttctttggcacccacaaagatttatctggaatttctgatgccgagattaactttttcaac
aaagagacacagaggcttttatggaaaaataacatgacttttcccaaggcagatgccaaa
cttaaatcccttggccttatgggccatgccaaaaaaagcaatgtccctcaagagaatgac
gcagaaaaacctctagatggtgctcagacaaatgaagatgttgatattcctggaccatta
gaaactgaagatgttcgtcccacgaaaaaggcaaaatctgacgagacttctaaacttgga
gacattattgatggggtgatgaatgtggacgatgaaacggaaaagaccgggcattctact
tcaaaagccaagatagaggatgaggaggatagcatcaaagttgttgaaaccgacgggagc
ctaaaatcgcaccctcgcgaaaagaaaaagcttattgattttagggataagttgtacctt
gcacccctaacaactgtgggcaatcttcccttcagaagactttgcaaagttttgggagct
gatgtgacttgtggtgagatggccatgtgtacaaatcttttgcagggccaagcttccgaa
tgggctctgcttagaaggcattcatcggaagatctgtttggtgttcagatttgcggttct
tttccagacacggtgtctcgtgcggttgagcttatagatcgagaatgcacggttgatttc
atagacatcaacatgggctgcccgatagatatggttgtgaacaaaagtgctggttcagct
cttctcaacaaaccattacgaatgaagaacatcgtggaggtctcttcttccattgttgaa
acacctatcactatcaaggtacgaactgcattttttgagggtaagaaccggatagactcg
ttaatttcagatattggggattggggagccactgcagtgacgattcatgggcggtcaaga
caacaacgttatagcaagtctgcggattgggactatatataccagtgtaccaaaaacgct
tcctctaacctacaagttataggaaatggagatgtgtactcttttttagactggaacaaa
cacaagtctgactgtcctgagttgtctagctgcatgattgctcgtggagcattgatcaag
ccttggatatttactgaaattaaagagcaacggcactgggacattacctccggggaaaga
ctcaacatcttcaaggactttgtacgttttggtcttcaacattggggatccgatacaaaa
ggagttgagacaactaggcatttcttactggagtggctaagctacacgtttaggtacata
cctgtaggtctgctggatgtgatcccgcagcaaatcaactggcgtccgccttcttacttt
ggtcgtgatgatctcgagactctcatgatgtctgaatctgcgggtgactgggtgaggata
tcggaattgctgcttggaaaggttccggaaggcttcacgtttgcccccaaacacaaatcc
aacgcttatgatcgagctgaaaatggctaa

DBGET integrated database retrieval system