Brassica rapa (field mustard): 103860460
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Entry
103860460 CDS
T03449
Name
(RefSeq) protein FIZZY-RELATED 2
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103860460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103860460
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
103860460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
eIF2A
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_WDR41
Beta-prop_DCAF4
Tricorn_2nd
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_Vps41
WD40_RFWD3
Peptidase_M10_C
MIOS_WD40
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
103860460
NCBI-ProteinID:
XP_009136311
UniProt:
A0A398ALB5
LinkDB
All DBs
Position
A01:7076167..7078776
Genome browser
AA seq
471 aa
AA seq
DB search
MEDPTASNVTPPANSSSQIIIPSPSSVKVSLESRINRLINANQSPSPSRSIYSDRFIPSR
SGSNFALFDLASPSPSKEDGAGSYATLLRAAMFGPETPEKRDITGFSTSRNIFRFKTETN
RCLNSFSPFVSDDGPGVSHAPIKALRKVSRSPYKVLDAPALQDDFYLNLVDWSAQNVLAV
GLGNCVYLWNACSSKVTKLCDLGADDSVCSVGWAFRGTHLAVGTSSGKVQIWDASRCKRT
RTMEGHRLRVGALAWGSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDN
RELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFW
NTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYR
VLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSDIGSSFFGRTTIR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcctaccgcaagcaacgtgactcctccggcgaattcttcttctcagataata
attccatcgccgtcgtcggtgaaagtgtcactcgagtcacgaatcaaccgtctgatcaat
gccaaccaatcaccatcaccgtcacggtctatatactccgacaggttcataccaagcaga
tccggatccaatttcgcgctcttcgatctcgcttctccttctccgagcaaagaagacggc
gcaggctcgtacgcgactctcttgcgcgcggcgatgttcggccccgagacgccggagaaa
cgggacatcactggcttctcaacgtcgaggaacatcttccggtttaagaccgagacgaat
cggtgtttgaattctttttctcctttcgtgtctgatgatggtcctggtgttagtcatgct
ccgatcaaggccttgaggaaggtgtctcgatcgccctataaggtactagatgcaccggct
ttgcaagatgatttttatttgaatctagtggactggtctgcgcaaaatgttcttgcggtg
ggactagggaactgcgtgtatttgtggaacgcttgtagcagcaaggtaactaaattatgt
gatctgggagctgatgatagtgtttgctctgttggttgggcatttcgtggaactcatctt
gctgtcggaactagttccgggaaagtacagatatgggatgcgtcgcgttgcaagagaaca
agaacaatggaaggacatagactaagagttggagcactggcgtggggatcatctgtactg
tcatctggtagtagagacaagagtattcttcagagagacatacgttgtcaagaggatcat
gtcagtaaacttgcaggtcacaaatcagaagtatgcggactcaagtggtcttatgacaac
agagagttagcttctggtggaaacgacaatcggctttttgtatggaaccaacattcaaca
caaccggttttgaaatatagcgaacacacagcagcggttaaagccatagcttggtcacct
catgttcacgggcttcttgcttccggtggtgggactgctgatagatgcatacgtttttgg
aatacaactacgaatactcatttaagttccattgatacttgcagtcaggtatgtaatcta
gcatggtctaagaacgtaaacgagctggttagcacgcacggatactcccaaaaccaaatc
atagtctggaaatacccaaccatgtccaaaattgcaactctgacaggtcacacgtaccgt
gttctgtaccttgcggtctcacctgatggacagactattgtaaccggagcaggagatgaa
accttaaggttctggaatgtctttccatccccaaaatctcagaacacggatagtgatatt
gggtcgtcattctttggtagaacaaccattcgttga
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