Brassica rapa (field mustard): 103860493
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Entry
103860493 CDS
T03449
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23 isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103860493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103860493
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
103860493
Ubiquitin system [BR:
brp04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
103860493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-A_UBE2O
SH3-C_UBE2O
CFAP90
Motif
Other DBs
NCBI-GeneID:
103860493
NCBI-ProteinID:
XP_009136341
LinkDB
All DBs
Position
A03:complement(21885718..21905232)
Genome browser
AA seq
1081 aa
AA seq
DB search
MEHEQDDPGVDLPLDGSLESEPICDDPSRIDKADDSGSNEHPNIYRHDIVRNNKTGSIGV
VSEVAGDSDSESDISDEENYGGDDEDDDNDDDGAEEEGKKANEENVGRGEKNYKCGTLEG
DQIRVLWMDDTEPVQDVNNVTVVDRGFLHGDYVASSSDPTGQVGVVVDVDMSVDLLALDG
STHKDISTKELKRVRDFCVGDYVVHGPWLGRIDDVLDNVTVLFDDGSMCRVLRAEPLQLK
PVSQSNLEEDANFPYYPGQRVKATSSSVFKSSRWLSGLWKPNRLEGTVTKVTAGSIFVYW
IASAGFGPDSAVSPPEEQSPSNLTLLSSFTHANWQVGDWGLLPSVNQSATIPLHKHVSKL
RLYDSQAKRADREQNKSDLEDELSEEKSEPVGITAEALPKETTVSSTSKEPAHEPWPLHR
KKIRKLVIRKDKRVKKKEESFERALLIVNSRTLVDVAWQDGTVECRREATTLIPIETPGD
QEFVPEQYVVEKASDDDDNNTTEPKRVGVVKSVNAKERTASVRWLKPRLTAEEPREFDKE
EIASVYELEVHPDYDYCYGDVVVRLSPVTMALPASSEATEQDDGHQDAEYHQEAKVHDKE
ENEVDTNIPELSWVGNITGLKDGDIEVTWADGMVSTVGPQAIYVVGRDDDESIAAESEAS
DAASWETVDDDNGGAPEEDLGRGSFLEENSDAGNNGENDSGRNGALALPLAAVEFVTRMA
SGIFSRGQKAEDSSSSSLTDDNGLTNSSHERGSFLDDHSPTNFSATDNCDLEGTVVENEA
VERSEGEKSEEPIPSESDSCSFKRFDISQDPLDHHYLGSDEQKTKERRWFKKVDQDWKIL
QNNLPDGIFVRVYEDRMDLLRAVIAGAYGTPYQDGLFFFDFHLPSDYPSVPPSAHYHSGG
WRLNPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYD
KQIGTAEGEKNSLGYNENAFLLNCKTMMYLMRRPPKDFEELIKDHFRKRGYYILKACDAY
MKGYLIGSLSKDASVIDESCSANSNSVGFKLMLAKIAPKLFSALSEVGADCNEFKHLQQQ
Q
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgagcaagatgaccctggggttgacttgccacttgatggttcattggaaagt
gagcctatatgtgatgatccaagtcgtatagataaggctgatgattcaggaagcaacgag
catcccaacatttatagacacgatattgtgagaaacaacaagacaggtagtattggggtt
gtgagcgaagttgctggtgattctgactctgaaagtgatattagcgatgaggaaaattat
ggtggtgatgatgaggacgatgataatgatgatgatggggctgaagaggaagggaaaaag
gccaacgaggaaaatgttggtcgtggagagaaaaactacaaatgtggtactcttgagggt
gatcagattcgtgttctgtggatggacgacaccgagccagttcaggatgttaacaatgta
acagttgtagatcgtggtttcttacacggagactatgttgcttcatcttctgacccaact
gggcaggtgggagtagtagtggatgtagacatgtcggtagatttactggctctggatggt
tctacccacaaagacatctcaacaaaagaattgaaacgcgtcagggatttttgtgttggt
gattacgtggttcacggcccctggctaggtaggatcgatgatgtgttggacaatgtgact
gtgttgttcgatgatggatccatgtgtagagtcctacgtgctgagcctcttcaactcaaa
cctgtttcccagagtaaccttgaagaagacgcaaactttccttattacccgggccagcgt
gtcaaagcaacctcctcgtcggttttcaagagttcccgttggttgtctggattgtggaag
cccaatcgcttagaaggtactgtgactaaagtcaccgctggatctatttttgtctactgg
attgcttcagctggctttgggccagattctgctgtctccccacctgaggagcagagtcca
agtaacttgacgttgttgtcatctttcactcatgctaactggcaagttggtgactggggc
cttcttccatcggtgaatcagtctgctacgattcccttgcacaagcatgtttctaaatta
cgactttatgattctcaagcaaaaagggcagaccgggaacagaataaatccgatttagaa
gatgaactaagcgaagaaaaaagtgagcctgttggcattactgctgaagctttgccaaaa
gaaactactgtttcttctacttctaaggagcctgcgcatgaaccttggcctctccatcgt
aagaagatacgcaaactcgttatcagaaaggacaaaagggtaaagaaaaaagaggaaagc
tttgaacgagctctgttgatagttaacagcagaacgcttgttgatgtagcctggcaggat
ggtacagttgaatgtagacgggaagcaacaacattgattccgattgagacccctggcgat
caagaatttgtccctgagcagtatgtggtggagaaggcttcagatgatgatgataataac
acaactgaacctaagcgtgttggggttgttaaaagcgtcaatgcaaaagaacgtactgct
tctgtgagatggttgaagccgcgtctaacggcagaagagcctcgtgagtttgacaaggaa
gaaattgcaagtgtttatgagctagaggtccatcccgattatgactactgttatggggat
gttgttgttcggctgtcacctgttaccatggccttaccagcatcttctgaggcaacagag
caagacgatgggcaccaagatgcagaatatcatcaagaagctaaagtccatgataaggaa
gaaaacgaagttgatacgaacattccggagctctcatgggttggaaatattactggactt
aaggatggtgatattgaagtaacatgggctgatggaatggtctcaacggttggccctcaa
gcaatttatgtagttggtcgggacgatgatgaatcaattgctgcagaaagtgaagcaagt
gatgctgctagttgggaaactgtagacgacgacaatggtggtgctcctgaagaggatctt
ggaaggggtagttttcttgaggaaaactctgatgcaggaaacaatggtgagaatgattct
gggaggaatggtgccctagctctcccactagctgcagttgaattcgtgactcgaatggct
agtggaatcttttcacgtggacagaaagctgaagattcttccagttctagtctcacagat
gacaatggattgacgaactcttcccacgagaggggttctttccttgatgatcatagtcct
acaaatttcagtgccactgataactgtgatttagagggaacagttgtagaaaatgaagca
gtggaaagatcagagggtgaaaaatctgaagagccaataccttctgaaagtgatagttgc
agtttcaaacgctttgatatatcacaagatcctctggaccaccattatcttggctcagat
gagcagaaaacaaaggaaagacggtggttcaaaaaggttgatcaagactggaaaatactt
cagaacaatcttccggatggaatatttgttcgagtttacgaagatcgaatggatctgtta
agggcggttatagctggggcttatggaacaccataccaagatggtctcttcttttttgat
tttcaccttccatctgactaccctagtgtgccaccgtcggcacattaccattctggtggt
tggaggttgaaccccaatctgtatgaagaaggcaaggtctgtcttagccttcttaatacg
tggacaggcagaggaaatgaagtctgggatcccaaatcatctagcatccttcaagtcctt
gtttcactccagggattagtgttgaattcaaagccttatttcaatgaagccgggtatgat
aagcagataggaactgcagaaggagagaaaaactcactggggtataacgagaatgccttt
cttctaaattgtaaaaccatgatgtatcttatgcggagaccaccaaaggattttgaagaa
ctcatcaaagatcatttcagaaaacgcggttattacatcttgaaggcatgtgacgcctac
atgaaaggatatctaataggttctctcagcaaagatgcctcggttattgatgaaagctgc
agtgctaattcaaattcggttggttttaagcttatgttggctaagattgcgccaaagcta
ttctcagcgctgagtgaggtaggcgctgactgcaatgaattcaagcatcttcagcagcag
caataa
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