KEGG   Brassica rapa (field mustard): 103860568
Entry
103860568         CDS       T03449                                 
Name
(RefSeq) histone deacetylase 5
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brp03036]
    103860568
Enzymes [BR:brp01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103860568
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     103860568
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 103860568
NCBI-ProteinID: XP_009136431
UniProt: M4D924
LinkDB
Position
A03:complement(22258108..22261537)
AA seq 647 aa
MAMAGESSNNNYGDCDGKSHRKVGLVYDETMCKHDTPNGEDHPECPDRIRVIWEKLQLAG
VSQRCVVLGGSKAEDKHLQLVHTKDHVSLVKSLSTKKKDYRRNRIASQWNSIYLNGSSSE
AAFLAAGSVVELAEKVAEGELDCGYAIVRPPGHHAEPDEAMGFCLFNNVAVAASYLLDER
PELGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEHGGFYPAGDDGDYNMVGEGP
GEGFNINVPWEQGRCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVT
PYGYSVMLKKLMDFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKPIQGSSEAYPFES
TWRVIQAVRKKLSAYWPSLADVLSSNLINQKTPTPIIVFSSSDSETEDYADDILDQMSRL
NIENHHVDTVSTSWRRDLSKVDVWYASFGSNMWKPRFLCYIQGGQVEGMKKVCVGSMDKT
PPKQIMWESFPHRLFFGRESSVTWGVGGVAFINPLTDLNDQTHMCLYRITLEQFNDVLFQ
ENGLKVDSDSPLVDLDTLQLVEKKGSVPLASGGWYGNVVCLGKECDVPILTMTCTVAAVE
KFKSGEIPLRPPSEAYVNTMVRGLVEGGRLSEEEAKAYIDNAASKPL
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggcaatggccggtgaatcttctaataacaactacggagactgtgacgggaagagtcat
agaaaggtgggtcttgtttatgacgagacgatgtgcaaacacgacacacctaacggagag
gatcaccctgagtgtcctgatcgcatcagagttatctgggagaagctccagctcgccgga
gtctctcaaagatgtgtggttcttggtggtagcaaagctgaagacaagcatctccaattg
gttcacacaaaggaccatgttagtttagttaagagtttaagcacaaagaagaaagattac
cggagaaacaggattgcttcacagtggaattcaatatatctgaatggaagttcatctgaa
gccgcgtttcttgcagctggatctgttgtagagttggcggagaaagttgcagaaggagag
ttagattgtgggtatgctattgtcaggcccccagggcaccatgctgagccagatgaagcc
atgggtttctgtttgttcaacaatgtagcagtcgctgctagctatttacttgatgaaaga
cctgaactaggtgtcaagaagattctgatagttgattgggatgtccatcacggaaatggt
acgcagaagatgttctggaaagatcctcgagtactatttttctctgtccacaggcacgag
cacggaggcttctatccagcgggtgatgatggagactacaacatggttggggaaggtcca
ggtgaagggtttaacataaacgttccatgggaacaaggaagatgcggagatgcagattat
cttgccgcatgggaccatatcttgattcctgtggcgaaggagtttaatcctgatattatt
ttgttatcagctggatttgatgcagctattggtgatccacttgggggctgtcgtgttaca
ccatatggatattcagttatgttgaagaagttgatggattttgcacaaggaaagattgtg
ttagcgttagagggagggtacaatcttgactcaattgcaaagtcttctctggcatgtgtc
caagtcttgcttgaagacaaaccaattcaaggttcttctgaagcttacccattcgagtct
acatggcgtgtcatacaagcggtacgaaagaagctgtctgcatattggccttcacttgca
gatgtattatcatcgaaccttattaaccagaaaactcccactccaatcatcgttttctca
agctccgactctgaaactgaagactacgctgatgatatcctggatcaaatgtcgagactc
aacattgagaaccaccacgtagatactgtctctacatcttggagaagagatctctcaaag
gttgacgtttggtatgcctcttttggatccaacatgtggaaaccaaggttcctttgctat
attcaagggggacaagtagagggaatgaaaaaggtctgcgttggttcaatggataaaact
ccaccaaagcaaataatgtgggaatcatttccacacaggctgttctttggacgtgaatcg
tcagttacttggggtgtaggaggagttgcttttatcaacccacttactgatctcaatgat
caaactcacatgtgtttgtacagaatcacgcttgagcagttcaacgatgttctgtttcag
gaaaatggattgaaagttgattctgattctccgcttgttgatctagatactctgcagtta
gtagagaagaaaggatccgttccacttgcttcgggtggctggtatggaaacgtagtctgt
ttggggaaagaatgcgacgtccctatacttacaatgacttgcacagtagctgctgttgag
aagttcaaatcaggtgagatcccattaagacctccttcagaagcatatgtcaacactatg
gtgaggggacttgttgaaggaggaagattatctgaagaagaagctaaggcttacatagac
aatgctgcatctaaacctctctag

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