Brassica rapa (field mustard): 103860580
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Entry
103860580 CDS
T03449
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00531
Glycosaminoglycan degradation
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
103860580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
brp00536
]
103860580
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
103860580
Glycosaminoglycan binding proteins [BR:
brp00536
]
Heparan sulfate / Heparin
Enzymes
103860580
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Leu_Phe_trans
Motif
Other DBs
NCBI-GeneID:
103860580
NCBI-ProteinID:
XP_009136456
UniProt:
M4D914
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All DBs
Position
A03:complement(22361157..22365545)
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AA seq
541 aa
AA seq
DB search
MSYNVCFLVFLSCLLLPGVTFATNMEQTTIVIDGTRQIAEIDENFVCATLDWWPPEKCNY
DQCPWGYASLINLNLSSPLLAKAIQAFKTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTD
DGLFGFSEGCLYMERWDELNRFFHATGAIVTFGLNALYGREKLRGNAWGGEWDHTNTQDF
MNYTVSKGYAVDSWEFGNELSGSGIGASVSVELYGNDLIVLKDVIKNVYKTSQTKPLLLA
PGGFYEEKWYSELFRLSGPGVLDVMTHHIYNLGPGNDPKLVSRILDPKYLSGSVTGLFKN
VERTIQEHGPWASAWVGEAGGAFNSGGREVSETFINSFWYLDQFGMSSMHNTKVYCRQAL
VGGFYGLLEKETFVPNPDYYSALLWHRLMGKGVLGVQTNASEYLRTYVHCSKGRAGITIL
LINLSKQTTFTVGVSNGVKVVLQAESTKRRSFLETIKSKVSWVGKKASDGYLNREEYHLS
PKDGDLRSKIMMLNGDPLEPTVTGDIPKLEPVRHGVKSPVYINPLSISFIVLPTFDAPAC
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagctataacgtttgtttccttgtgttcttgagttgtctacttctacctggtgttact
tttgctaccaacatggaacaaaccactatagtaatagacggtacacgtcaaatcgctgag
atcgatgagaactttgtctgcgcaacacttgattggtggccacctgaaaaatgcaactat
gatcagtgtccttggggctacgcgtcactcatcaacttgaacttgtcttctcctcttctt
gctaaagctattcaagcttttaagacactgaggataagaataggtggctccttgcaagac
caagtgatctacgacgtaggagacttgaagactccttgcactcagttcaaaaagactgac
gatggcttgttcggattttctgaaggatgtttgtatatggaacgttgggacgaacttaac
cgtttcttccacgcaaccggggctattgtgactttcggtttgaatgcgttatacgggaga
gagaaactcagaggaaatgcatggggaggggagtgggatcacaccaatactcaagatttc
atgaactatacagtctcaaagggttacgctgtagactcatgggagtttggtaatgagctt
agtggaagcgggattggtgcaagtgtaagtgtagagctttacggtaacgacttgatagta
cttaaagatgtaatcaagaacgtttacaagacttctcaaaccaagccattgcttctagct
cctggagggttctatgaagaaaaatggtactcggagctttttcgcctctctggacctggt
gttcttgatgtcatgactcatcatatatacaaccttggtccagggaatgatccaaagctt
gtgagtaggatactagatcccaagtacttgagcggatcagttacgggactattcaagaat
gttgagagaacgattcaagaacatggaccttgggcttctgcttgggttggagaagctgga
ggagcttttaatagcggtggccgggaggtttctgagacattcattaacagcttctggtat
ctagatcagtttggtatgtcgtctatgcacaacactaaagtatactgcagacaagctttg
gttggaggtttctacgggctgctcgaaaaggaaacgtttgttcccaatccagattactac
agtgcgcttctttggcatcgtttaatgggtaaaggcgttcttggcgttcagacaaatgcg
tcagagtatctacggacttacgttcattgttccaaaggaagagcggggataacgattctt
ctgattaatctgagcaagcaaacgacgtttacagtaggagtcagcaatggcgtgaaggtg
gttttgcaagcagaatctacgaagaggagatctttcttggaaacaatcaagagcaaggtt
tcttgggtgggaaagaaagcttctgatggatatttgaacagagaagagtatcacttgagt
ccaaaagacggtgacttgaggagcaagataatgatgttgaatggtgaccctttggaacca
acggtcactggagatatcccaaagcttgagccggttcgccacggagtgaaatctcctgtt
tatatcaatccattgtccatctcgttcattgtgttgcctacctttgatgctcctgcttgt
tcatga
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