Brassica rapa (field mustard): 103860596
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Entry
103860596 CDS
T03449
Name
(RefSeq) structural maintenance of chromosomes protein 6B
KO
K22804
structural maintenance of chromosomes protein 6
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103860596
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
103860596
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
SMC_hinge
SbcC_Walker_B
AAA_21
YwqH-like
ATG17_like
ABC_tran
AAA_15
Rrn6_HB
AAA_13
DUF948
Motif
Other DBs
NCBI-GeneID:
103860596
NCBI-ProteinID:
XP_009136476
UniProt:
A0A3P6AEI3
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All DBs
Position
A03:complement(22457284..22464019)
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AA seq
1057 aa
AA seq
DB search
MAKPGARPSASFIKQRSGSGTILRIKLENFMCHSNLQIEFGEWVNFITGQNGSGKSAILT
ALCVAFGCRAKGTQRASTLKDFIKTGCSYAVVHVEMKNQGEDAFKPEVYGDVIIIERRIT
ESASSTILKDHEGKKVSSRKDELRELVEHYNIDVENPCVVMSQDKSREFLHSGNDKDKFK
FFFKATLLQQVNDLLQSIYEHLNSATAIVDEMEETIKPIEKEINELRGKIKNMEQVEEIA
QKLQQLKKKLAWSWVYDVDRQLQEQTDKIVKLKERIPTCQAKIDWELGKVESLRDRLTKK
KAKVACLMDESTAMKREIETCHQSAKTAAREKIALEEEFNHKRNSVQKIKDRVRRLERQV
GDINEQTMRNTQAEQSETEEKLRYLEQEIEKAETLLSRLKEEENSLLEKASAGRREMEHI
EDMIRDHQKRQNNINSNIYDLKKHQTNKVTAFGGDRVIYLLQAIERHHRRFKKPPIGPIG
SHVTLINGNKWASAVEQALGNMLNAFIVTDHKDSLTLRSCANEANYKNLRIIIYDFSRPR
LNIPRHMIPQTEHPTILSVLHSDNPTVLNVLVDVSNVERQVLAENYEVGKAVAFGQRLSN
LKDVYTLDGYRMFFRGPVQTTLPPIPRKPTRLCASFDDQIKDLEIEASRGQNEINQCMRR
KRGAEENLEELELKIRTLKKHRSQAEKVLTTKEFEMRDLKSTVAAENEASSSSSVNELQL
EIMKEREEMEEKEAFLEKLQMCLKEAELKANKLNASFENLRESAKGEIDAFEEAENELKK
IEKDLQSAEAEKIHYENIMKNKVLPDINEAEANYEELKTKRKESDQKASEICPESEILSL
GPWDGSTPEQLSAQINRMNQRLHRENQQFSESIDDLRMMYEKLERKIAKKRKLYQGYREK
LMACKTALDSRWGKFQRNASLLRRQLTWQFNSHLGKKGISGHIKVSYENKTLSIEVKMPQ
DATSNAVRDTKGLSGGERSFSTLCFALALHDMTEAPFRAMDEFDVFMDAVSRKISLDALV
DFAIAHGAQWMFITPHDISMVKSHERIKKQQMAAPRS
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctggggctcgacccagcgcttccttcatcaaacagcgttccgggtcgggt
actatccttaggattaagctcgagaatttcatgtgccatagtaatctccagatcgagttt
ggcgagtgggtcaatttcatcaccggccaaaacggaagtggaaagagtgcgatattgact
gctctatgtgttgcattcgggtgtagagcgaaagggactcaacgcgcttccactttgaag
gatttcattaaaactggatgcagctatgcggttgttcatgttgaaatgaaaaaccaagga
gaagatgcttttaagcctgaagtatatggtgacgttataattatcgagcgtaggataacc
gagtctgctagttctaccattctcaaggatcatgaagggaaaaaagtaagtagccgaaag
gatgagctacgggaacttgttgaacattataatattgatgttgagaatccttgcgtagta
atgagtcaagacaagagcagggagttcctgcattctggaaatgataaagataaatttaag
ttcttttttaaggcaactcttctccagcaagttaatgatcttctccaaagtatctacgag
cacttgaattctgcaactgccatagtcgatgaaatggaggaaacaattaaaccaatagag
aaagagatcaatgagttgcgtggaaagataaagaacatggaacaagttgaagaaatagct
caaaagttacagcagttgaaaaagaaacttgcttggtcttgggtgtatgatgtggatagg
cagctccaggaacagaccgataagattgttaagcttaaagaacgcatacctacttgccaa
gctaaaatagactgggaactaggtaaagtcgaatcattaagggatcgcttgaccaagaag
aaagctaaagttgcatgtctgatggatgaatcaactgcgatgaagagagagatagagact
tgtcaccaatcagccaagacggcggcacgagaaaagattgctctagaagaagaattcaat
cataagcgaaatagtgttcagaagattaaggatcgtgttagaaggcttgaacggcaggtt
ggagatatcaatgaacagacaatgagaaacactcaggctgaacaatctgaaaccgaggag
aaactgagatacttggaacaggagattgagaaggctgaaacactactttccagattgaaa
gaggaagagaattccttactggaaaaagcgtcagctggaaggagagagatggaacatatc
gaggatatgattcgagatcatcaaaagagacaaaataatataaactccaacatttatgat
ctaaagaaacatcaaacaaacaaggttactgcgtttggaggggacagagtcatttatctt
ctgcaggctattgagagacatcatcgtagattcaaaaagcctccaattggtcctattggc
tcccatgtgacgttgatcaatggcaataaatgggcgtctgcagttgaacaagctcttgga
aacatgttaaatgcattcattgtgactgatcacaaagattctctcactttaagaagctgt
gctaatgaagccaattataaaaaccttaggattatcatatatgacttttcgagaccaagg
ttaaatataccaaggcacatgattcctcagacagagcatccaacaattctctctgtcttg
cattctgataatccaaccgttcttaatgtcttggtggatgtgagtaatgttgagaggcaa
gtactggcagagaactatgaggtgggaaaggcagttgcttttgggcaaaggctctcaaat
ctgaaggatgtttacactttagacggatacagaatgttttttcgtgggccagttcagaca
actcttcctcctattcctcgtaaacctacgcgactatgtgcttcttttgatgaccagatc
aaggatcttgaaatagaggcttctcgaggacaaaacgagataaatcaatgcatgagacgt
aagaggggagcagaggagaatctcgaagaacttgagttgaaaatccgcacactgaagaag
caccgaagccaagcagagaaagttttgacgacaaaggaattcgagatgcgagatttgaag
agcacagtcgctgcggagaatgaagcatcatcgtcttcaagtgttaatgagcttcaactt
gaaatcatgaaagaacgagaagaaatggaggagaaagaagctttccttgagaagctccag
atgtgcttgaaagaagctgaactaaaagctaataaacttaatgcttcatttgagaactta
cgtgagtcagccaagggtgaaattgatgccttcgaggaagcagagaacgagctaaagaag
attgagaaagatcttcagtctgccgaagcggagaaaatccattacgagaatataatgaaa
aacaaggtcctacctgatatcaatgaggctgaggctaattatgaggagcttaaaactaag
cgaaaggaaagcgaccagaaggcctctgaaatttgtcctgagagtgagatattgtctttg
gggccttgggatgggagtactcctgagcagctcagtgcgcagattaacagaatgaatcag
agacttcatcgagagaatcagcagttttctgaatcaatcgatgaccttaggatgatgtac
gagaaactagaacgaaagattgcaaagaagcgcaaattgtaccaaggctatcgagaaaaa
ctcatggcctgcaaaactgctctggattcgcggtggggcaagtttcaaaggaatgcatct
ttgcttcggcgccagctaacgtggcaattcaactctcacttgggaaagaaaggtatcagt
ggacacatcaaagtcagttatgaaaataaaactttgtccatagaggttaagatgccgcaa
gatgcaactagtaatgccgttcgagacaccaaaggtctttcaggaggagaacgttctttc
tcaactttgtgctttgcattagctcttcacgatatgacagaagccccatttcgagcaatg
gatgagtttgatgtgtttatggatgctgtaagccggaaaatcagtttggacgctctggtg
gatttcgcaattgcacatggagcgcagtggatgttcatcactcctcatgatatcagcatg
gtgaagtcgcatgagaggataaagaagcagcaaatggccgctcctcgttcttga
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integrated database retrieval system
