Brassica rapa (field mustard): 103860952
Help
Entry
103860952 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103860952
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103860952
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103860952
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103860952
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103860952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103860952
NCBI-ProteinID:
XP_009136881
LinkDB
All DBs
Position
A03:24179908..24186711
Genome browser
AA seq
629 aa
AA seq
DB search
MLIADSDLPPPPLTPSPIETLDESIGVQSLALSSPNHADEEVSLETLTVPSLDVPVDYDE
PFSDIGCLSDNYKRWTPNVSPGYDTDDESTSYQPLLSFIQDPPTMIDDEPTGVGVGLWNL
GNSCFVNSVLQCLTHTLPLIESLCSYEPPEPCNCGNEWFCVRSAFKGHLEAALTTSRSSI
APYSFLNNLNYFSADFRRYQQEDAHEFLQAFLDKLERCCLEDPSSDSLSSQDVNLVQRIF
GGRLVSQLRCCDCNSVSETFENSLGLSLEIEDVDNLQSALDSFTRVEKLDEPMTCDNCKE
KVSKEKQLLLYKLPQVVTFHLKRFKNNGFFMEKIFNHVKFPLEIDLQPYMVRSQNNEVTA
KYRLYAFVEHFGSLAYGHYSSYVRSAPKIWHQFDDKQVTRIDEDRVLSQDAYILFYAREG
IPLFSTTFQEVHPLVEASLQNPSPNSVLDPTSGECSSEISYENAYKSNKLLCENSAGVIQ
HVKPEERYVSLSNEFDEDVMLQSTESCGEDDDNSNDSCTEKEVDSRLDIERAATGDDSVP
YPMVQDQDSSQRQQDGTFLIQLEKLEATKNQEEEEEPCKQPLLISHVGESKENEIVHRRG
PVKKPSPRERVLDQGISTTGSPPKKLKKA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctgattccgacttgcctcctccgccgctaacccccagcccaatcgaaacc
ctagacgagtcgattggagttcaatcactggctctttcctccccgaatcacgcggacgag
gaggtctcactcgaaaccctaaccgtgccttctcttgacgttcccgtcgactacgacgag
ccgttctctgacattggttgtttgtcggataattacaaacggtggactcctaatgtctcg
cctgggtacgatactgacgacgagtctacgagttaccaacctttgcttagtttcattcaa
gatcctcccacgatgatcgacgacgagcccactggtgttggtgttgggctttggaatcta
ggcaacagttgtttcgttaactcggtcttgcagtgtttgactcatactctccctcttatc
gagagtctttgctcttacgaacctcctgagccttgtaactgtgggaatgagtggttttgt
gttagaagtgcttttaaaggtcacttagaggctgcgttgacgacttcacgatcttcaatt
gctccctactccttccttaacaatctcaactatttttcggctgacttcaggcgttaccag
caagaagacgctcatgagtttctacaagcgtttttggataagttggagagatgttgtttg
gaggacccgagtagtgactctctctcttctcaagatgttaacttggttcagcgtatcttt
ggtggtcgtctcgtcagtcagcttcgttgctgcgactgcaactctgtttctgagactttt
gaaaactctcttgggttgagtttggaaatcgaagatgtggataaccttcagagcgcgctg
gattcgttcacccgtgtggagaagcttgacgagccgatgacttgtgataactgtaaagaa
aaagtttcaaaggagaagcagctcttgctctataagctgccacaggttgtcacatttcat
ctgaagagattcaagaataatgggttttttatggagaagattttcaatcatgtcaagttt
ccgttggagatagacttgcagccatatatggtcagaagccagaataacgaagttactgca
aaatatcgtctttatgcttttgtggagcattttgggtcattagcttacggtcattactct
tcctatgtgaggtctgccccaaagatatggcatcaatttgacgacaagcaggtcactaga
atcgatgaagatagagtgttatcacaagacgcatatattctcttctatgcaagagaaggg
atccccttgttttccaccacttttcaagaggtgcatccattggttgaggctagcttgcaa
aatccttcgcccaactctgtccttgatcctaccagcggggagtgttcatctgaaatcagc
tatgagaatgcatataaatccaacaaactactctgtgaaaactcagcgggagtaatccaa
catgtcaagccagaagaaagatatgtttccctctccaacgagtttgacgaagatgtgatg
ttacaatcaacagagtcatgtggcgaagatgatgataattctaacgattcatgcactgaa
aaagaagtagattctcgcttagacattgaaagagctgccactggtgatgactctgttcct
tatcccatggttcaagatcaagactcgtctcagagacaacaggatggaactttcctaatt
caactcgagaaattggaagccacaaagaatcaagaagaagaggaagaaccttgcaagcag
ccattactaataagccacgttggagagtctaaggaaaacgaaattgttcatagaagaggc
cccgtgaagaaaccttcacctcgtgaaagagtgttggaccaaggcatatctacaactggt
tctccacctaaaaaacttaaaaaagcatga
DBGET
integrated database retrieval system
