Brassica rapa (field mustard): 103861139
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Entry
103861139 CDS
T03449
Name
(RefSeq) plant UBX domain-containing protein 5
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
brp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103861139
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103861139
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103861139
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103861139
03036 Chromosome and associated proteins [BR:
brp03036
]
103861139
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103861139
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103861139
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103861139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEP
UBX
UBA_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
103861139
NCBI-ProteinID:
XP_033144776
LinkDB
All DBs
Position
A03:23384879..23386872
Genome browser
AA seq
431 aa
AA seq
DB search
MEENKTTTTEMNENLITSFLEITSSSREEATFFLESHRWDLDAAVSTFLDTDATAAAAAA
DNLPAGPNPSLPPHSIPAASPHSPDYSPSESSPSRSRSPSPPSRDAPYRLRSKAAAASAN
QGAGGNPSGSRNTRSRQQAGNIRTFADLNRSPADGADSDSDEGQEYYTGGQRSGMMVQDP
TKKAKDVDALFEQARLSAVDRPVEPSRSASTSFTGASRMLSGEPVPSAAPPQQQQQQQDQ
PQLVMHTITFWRNGFTVDDGPLRSFEDPQNAAFMESIASSECPRELEPVDRNIRVHVDLV
RRDDNYIEPPKPKNSFQGVGRTLGASGSGSAAVEPSAQMNTAPVPSVGLVVDQAAPTTSI
QLRLADGTRLVSRFNNHHTVRDVRGFIDASRPGGSREYQLLTMGFPPKQLRELDQTIEQA
GIANSVVIQKF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacaagacgacgacgacggagatgaacgagaatctgatcacctccttcctc
gagatcacatcttcatcacgtgaagaagctactttcttcctcgaaagccaccgctgggat
ctcgacgccgccgtctccaccttcctcgacaccgacgcgacagccgccgccgccgccgca
gacaatctcccagctggtccaaaccctagtttacctcctcattcgatccccgccgcgtct
cctcactctccggattactctccgtctgaatcctccccttctcgctcgcgatctccctct
cccccttcccgcgacgctccctaccgtctccgatcgaaagccgccgccgcctccgcgaat
caaggagctggtggtaatccttcgggaagccggaatactaggagccgtcaacaagctggg
aacatccgtacgttcgccgatctgaaccgttcccccgctgacggcgcggatagtgattcc
gacgaagggcaagagtactatactggtggacagaggagtgggatgatggtacaagatcct
actaagaaagcaaaagatgttgatgcactctttgagcaagctaggctttcagctgtggac
agacctgttgagccatcgagatcagcttctacaagcttcactggagcttctaggatgtta
tctggtgagcctgttccctctgctgctcctcctcagcagcagcagcagcagcaagaccag
cctcagttggttatgcacaccatcactttctggaggaacggtttcaccgttgatgatggt
cctttgaggagttttgaggaccctcaaaacgctgcctttatggagagcattgcgagctca
gagtgccctcgtgaacttgaaccagtagataggaatatccgtgttcatgttgatctcgtc
aggcgtgacgacaactacatagagccaccgaagccgaaaaattcattccaaggtgtggga
agaacgctaggagcgagcggatccggatcagctgcggtagaaccatccgcgcaaatgaac
accgcgccagtgccatcagtagggctagttgtggaccaagcagcaccaacaacttcgatc
cagctaagattggcggacgggacacgccttgtatcgaggttcaacaaccaccacacggtg
agagacgtgcgtgggttcatcgacgcttcgagacccggtgggtccagagagtatcagttg
ctaaccatggggttccctcctaaacagttgagagaattggaccaaaccatcgagcaagct
ggtatagctaactcggtcgtcatccagaagttctag
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