Brassica rapa (field mustard): 103861416
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Entry
103861416 CDS
T03449
Name
(RefSeq) coatomer subunit beta'-3 isoform X1
KO
K17302
coatomer subunit beta'
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103861416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103861416
Membrane trafficking [BR:
brp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103861416
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
103861416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
WD40_like
Beta-prop_Nup120_160
WD_LRWD1
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
103861416
NCBI-ProteinID:
XP_009137369
LinkDB
All DBs
Position
A03:26433445..26440352
Genome browser
AA seq
919 aa
AA seq
DB search
MPLRLDIKKKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPV
RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRSIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIILTGSEDGTVRIWHATTYRLENTLNYALERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDSSGKIIWAKHNEIQTANIKSIGASYEVTDGERLPLAVKDLGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFNKNFQ
ERKSIRPTFSAEKIFGGSLLAMCSSDFICFYDWAECRLIQRIDVTVKNLYWAESGDLVAI
ASDTSFYILKFNRDLVSSHFASGRQTDEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNS
SSKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKANEILPTIPKEQHNNVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAKE
IAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYATDLSGLLLLYSSLGDAEGMSKLASLA
KEQGKNNVAFLCLFMLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
VNSKAAESLADPEEYPNLFEDWQVARSVEANAVEARGVYSAAENYATQADQPFITLVEAF
RNLQVEAEEPLENGDGDHEVAEENGDAENEGGEEEENEEEVNQEEGVVDEDSTDGSAVLV
NRSEGEEEWGTNSKDNQSA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagactcgatatcaagaaaaaatttgctcaacgatcagagcgagtgaaatct
gtggatctgcatcctacagagccatggattctagcgagtttgtattctggaaccgtctgt
atctggaactaccagactcagacgataacaaaatctttcgaggtcaccgaattgccagtt
aggtcggccaagtttatcccacgcaagcaatgggttgtggcaggagcggatgatatgtac
atccgtgtatacaactacaacacaatggacaaggttaaagtgtttgaggctcattccgat
tacattaggtgtgttgctgtccatccgaccctcccatatgtgctgtcatcttctgatgat
atgctcataaagctctgggactgggaaaatggttgggcctgtactcagatctttgaggga
cattctcactatgtgatgcaagtggtattcaatccaaaagacaccaacacttttgccagt
gcatcgcttgaccgttccataaagatatggaatcttggctccccagacccaaattttaca
ctggatgctcatcagaaaggagtcaactgcgtagattatttcacagggggtgataagccc
tacttaattactggctctgatgatcatactgctaaggtatgggactatcaaactaaaagc
tgtgtccagacgctggaagggcacacccacaatgtatctgcagtatgtttccatccggag
cttccaataatactcacaggctctgaggatggcactgttcgcatttggcacgccacgact
tacaggctagagaacacattgaattatgctctcgagagagtctgggccattggttacata
aaaagttcgcgcagggttgtgattggatacgatgaaggaaccatcatggttaaacttgga
cgagaaattcctgtcgctagcatggacagtagcggaaaaattatatgggctaagcataat
gaaatccaaactgcaaacatcaaaagtattggtgccagttacgaggttactgatggagaa
agacttcccttggctgttaaagatctggggacctgtgatctttatccacaaagcttgaag
cataacccaaacgggaggtttgtcgtagtctgcggggatggggagtacataatctacaca
gctttggcttggagaaataggtctttcggttctggactggaatttgtttggtcatccgag
ggggaatgtgcagttcgagagagctcgtcaaagataaagatattcaataaaaatttccag
gaaaggaagagtattcggcctactttctcagctgagaagatttttggaggatccttgtta
gcaatgtgttcaagtgatttcatctgcttttatgattgggctgaatgtaggctgattcag
cgaattgatgtcacagtaaagaatctttattgggcagaaagtggtgatttagttgccatt
gctagtgatacgtcattctacatcctgaagttcaatcgtgacttggtttcctcccatttt
gctagtggaagacaaactgatgaagaaggtgttgaggatgcttttgaggttctccatgag
aatgatgaacgtgttaggacaggtatatgggtcggggactgcttcatttacaacaactct
tcttcgaagcttaactattgtgttggaggcgaggtaaccacaatgtatcatttggaccgt
ccaatgtatttgttaggctatattgccaaccaaagtcgggtctacttggtagacaaagaa
ttcaatgtcataggatataccctgctgcttagcctgattgaatacaagactcttgtgatg
cgaggtgatttggacaaagccaatgaaattttacctacaattcctaaagagcagcataac
aatgttgctcatttcttggagtctcggggaatgattgaagatgctttagaaattgcgacc
gatcctgactacagatttgagctggccatacaattgggtagacttgaaattgccaaggaa
atcgctgaagaagtgcagagtgagtctaaatggaagcagttgggagagttagccatgtct
tctggcaagctccaactggccgaggattgcatgaagtacgctacggatttgagtggtttg
ctattactatattcttctttgggagatgctgaagggatgtcaaagcttgcatcccttgct
aaggagcagggaaagaacaatgtcgcctttctttgcttattcatgctgggtagattggaa
gattgtctgcagttattggtggagagcaaccggataccagaagctgctctgatggcacgt
tcttatcttccaagcaaagtttcagagatagtagctctctggagaaaagatctaagcaag
gttaattcaaaagcagcagaatctttggctgatcctgaagagtacccaaatctttttgag
gattggcaagttgctcgttctgttgaagctaatgctgtagaggcgaggggagtttattct
gctgcagaaaattatgcaacccaggccgatcaacctttcattaccctcgtggaagccttt
agaaacctgcaagttgaagcagaggaaccacttgaaaatggagacggagatcacgaggta
gcagaagaaaatggtgatgcagagaatgaaggaggtgaagaggaagagaatgaagaagaa
gtgaatcaagaagagggagttgttgatgaagattctacagatggtagtgctgtacttgtt
aatagaagtgagggtgaggaagagtggggtacgaatagtaaagacaaccaatcagcctaa
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