Brassica rapa (field mustard): 103861492
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Entry
103861492 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103861492
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103861492
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103861492
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103861492
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103861492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
103861492
NCBI-ProteinID:
XP_009137457
UniProt:
M4DRS6
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All DBs
Position
A03:complement(26841205..26845852)
Genome browser
AA seq
1012 aa
AA seq
DB search
MLLVLDLGLSSLFLLISLVLPVVAFVVRRKWRLAALRREEIRRLLIHASEEAARAELESS
VEFSSVYVPNSFQCPVCYSPASTRCSRCKAVRYCSGKCQIIHWRQGHRDECHPASVLYNT
DDEKSDCDLKFREGNEGLTPDETLLLHTEQVTTNVQVREAILSNPVISPEDGGGESADNK
DELMDKEEAVSVAETSGSSFSGFSSSPRNDSGDDDDISFCESSSSSDSEISEPPRDDHVS
VESEETFFSNIDDVKSKPLSPKFVQLVESANDLASLPKLSLNKPGGDPGQNPSESSSLVS
SVGTDGHPRSADPSLLKSSDFWGTALGSVERVSENCDGSKSGKSSLNLSFGSSRDISAAK
ISEPRNNNLKETTRAGLGTRNFSGEVNSRERIAKRFDEAEISLPRSSSLDVPSPLNPTVL
STVTLQKSKSTSAGSGFMLAPMKVGEVQRLSSKASDTRECADAMKHSALGAKSGRVLDHQ
KQNGLDVHRINSLNGRSGMKASVLKAVDQWTRPKSLAENEIAGNHSHKGLFSYELFSKLY
TSKIEFQPCGLINCGNSCFANVVFQCLMFTAPLTTYFLQQLHSRTCPNKEQCFTCGFEKL
VLMAKEGKSSLSPSGLLSQLQSIGIRLGNGKQEDAHEFLRFVVDTMQSVCIKASGCDMPK
TKKLEDTTLIGLTFGGYLRSKIKCMKCQEKSERREKMMDLTVEIDGDISTLEEALHRFTR
TEILDGENKYKCGSCKSYERAKKKLKITEPPNVLTIALKRFQSGKFGKLNKLVRFPETLD
LTPYVSGGSEKSHDYKLYGVIVHLDTMNAAFSGHYVCYVRNSQNKWYKADDSTVVTSDVE
SVWTKGAYMLFYARCSPTPPRLVLCNKSEASNKKSSVPVVPKATVSTASPVLSSNTPGGD
RPGNIQSFYSSFQRLQRILEEDSSSDSSSLFDSTSDECSCSTDSTSMDDFADFIFGDNQG
RAHGQSEAPSPTSSSSSSSPPFTRHSRLGDLSRSCQETCRNSRHRVSLGRER
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgctcctagttctggatctcgggctttcaagtctattccttttgatctctcttgttcta
cctgttgtcgccttcgttgttaggcgcaaatggaggctggctgctctgagaagggaggag
attcggagacttcttatccatgcgtctgaggaggctgctagagctgagctagagtcctcc
gttgagttctcttctgtttatgtccctaatagctttcagtgtcctgtctgctattctcct
gcctctactcgttgctctcgctgcaaagccgttcgctattgttccgggaaatgtcaaatt
atccactggcggcaaggtcacagagatgaatgtcatcctgcttctgtcttatataatact
gatgatgagaaaagcgactgtgatttgaagttcagagaaggaaatgaagggcttacccct
gatgaaactctattgctgcatacagaacaggttactactaatgtacaagtcagggaagca
atactctctaatcctgtcatatctcctgaagatgggggtggagaaagtgcagataacaaa
gatgaacttatggataaggaagaagctgtttccgttgcggaaacatctggatcctcgttt
tctggcttctcctcttcccctcgtaatgactctggtgatgatgatgatatttctttttgt
gagagctccagttcatctgattccgagatatcagagcctccacgtgatgatcatgtttct
gtagagtcagaggagacctttttcagcaatattgatgatgtgaaatccaaaccgttgtct
cctaaatttgtgcagttggttgagtctgcaaatgaccttgctagtttgcctaagttgagt
ctgaataaacctgggggtgatcccgggcagaacccgagcgaatcaagtagtttagtctct
tcagtaggtacggatgggcatccacgatcagctgatccgtctcttctgaagtcatctgat
ttttggggtactgctcttggatcagtagagcgtgtaagtgagaattgtgatggttctaaa
tctggtaaatcctctctgaatttgtcatttggctcctctagggacatctcagctgctaaa
atatctgagcctaggaataataatctaaaagaaactactagggctggattaggaactcgt
aatttttccggtgaagtgaattcaagagaaagaatcgccaaaagatttgatgaagctgaa
atttctttgccaagatcctcttctcttgatgtgccgagtcctttgaaccctactgttttg
tccactgtgacacttcagaagtcaaagagcaccagtgctggaagcggctttatgttggcc
cctatgaaggttggggaagtccaacgtttgtcgtccaaggcctcagatactagggagtgt
gctgatgctatgaaacattctgctctaggtgcaaaatctggaagagttcttgaccatcag
aaacagaatggtcttgacgttcatcgtataaattctctaaatggaagaagtggcatgaag
gcgtcagtcctgaaagctgtagaccagtggactagaccgaagtcattagctgagaatgag
atagcaggaaaccatagtcataaggggctcttttcatatgaactattttctaagctgtat
acaagtaaaattgagttccagccttgtggcctcatcaattgtggcaatagctgctttgct
aatgtggtcttccaatgcctgatgttcactgctcctctgaccacatacttcctccaacaa
ctccattctagaacatgtccaaacaaagaacagtgcttcacctgtgggtttgagaagctg
gtcttaatggcaaaagaagggaagtcttcactgtcccctagtgggttgctatcacagctg
cagagtattggaatccgtcttgggaatggcaagcaagaagatgcgcatgaattccttagg
tttgttgtcgacacaatgcagtctgtgtgcattaaggcatctggatgcgatatgccaaag
actaagaaattagaagatactactctcattggtttgacattcggtggatacctccgatca
aagattaaatgcatgaaatgtcaagaaaaatctgagcggcgtgagaaaatgatggatctg
acagttgagattgatggtgatatcagcaccttggaggaggctttgcatcgatttacaaga
actgaaatattggatggagaaaacaaatataaatgtggcagttgtaagtcctatgagaga
gccaaaaagaaactgaaaatcacagagcctccgaatgtccttacaattgcactaaaacga
ttccagtcagggaaattcgggaagctcaataagttggtcaggtttccagaaactctagat
ttgactccatatgtcagcggtggaagtgaaaaatcacatgactacaaactctatggagtt
attgttcacttggatacaatgaatgcagcattttctggtcactacgtgtgctatgttaga
aacagtcaaaacaagtggtacaaagctgatgatagcacggtagtaacttctgatgttgaa
agtgtatggacaaagggagcttatatgttgttctacgcaaggtgttctccaacgccacca
agattggtattatgtaacaaatctgaagcatccaataaaaaaagcagtgtgccggtggta
cctaaggctactgtgtctactgcaagtcctgtgttgtcttccaacactcctggtggtgat
cgacctggcaacatacagtcgttttactccagcttccagaggctgcagagaattttggaa
gaggactcgtcgagtgacagttcttctctctttgatagcacctcagatgaatgctcttgt
agcacagacagtacaagcatggacgactttgctgatttcatttttggagataatcaagga
cgggctcacggacagtccgaggctccctctccaacatcatcatcttcctcgtcttctcct
cccttcacaaggcattcccggctaggggacttgagtcgttcttgtcaagaaacttgcaga
aactcgagacatcgcgtgtccttgggaagagaaaggtaa
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