Brassica rapa (field mustard): 103861944
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Entry
103861944 CDS
T03449
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103861944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103861944
03041 Spliceosome [BR:
brp03041
]
103861944
03032 DNA replication proteins [BR:
brp03032
]
103861944
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
103861944
Spliceosome [BR:
brp03041
]
Complex A
U1 snRNP components
Sm proteins
103861944
U2 snRNP components
103861944
Complex B
U1 snRNP components
103861944
U4/U6.U5 tri-snRNP components
103861944
Complex C
U2 snRNP components
103861944
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
103861944
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF7688
Motif
Other DBs
NCBI-GeneID:
103861944
NCBI-ProteinID:
XP_009137904
UniProt:
M4E5N9
A0A8D9M4V8
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All DBs
Position
A03:complement(29065204..29066592)
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AA seq
88 aa
AA seq
DB search
MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL
GEILIRCNNVLYVRGVPEDEELGDAEQD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctaccataccagtaaacccgaagccgttcttgaacaatttaaccggaaagacggtt
atcgttaagctcaaatggggaatggaatacaaaggttttctcgcctctgttgactcctac
atgaacttgcagcttggaaacactgaagaatacatcgatggacaattgacagggaacctc
ggagagatcttgatcagatgcaacaacgttttgtatgtccgaggtgtgccagaagatgaa
gaactcggagatgctgaacaagactag
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