Brassica rapa (field mustard): 103861975
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Entry
103861975 CDS
T03449
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 9 isoform X2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103861975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103861975
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103861975
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
IQ_SCN5A_C
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
103861975
NCBI-ProteinID:
XP_009137935
UniProt:
M4E5L3
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All DBs
Position
A03:complement(29237605..29302206)
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AA seq
712 aa
AA seq
DB search
MDSRYSQGAEAGLNKCTLNLQGPSRANGAGQGNNNNASSGSFKKGFRRGSKGLWSLGRSI
GLGVSRAVFPEDLKVSERKIFDPQDKFLLLCNKLFVTSCILAVSVDPLFLYLPFINDSGK
CIGIDRRLATIATTLRTFIDVFYLFRMALQFRTAFVAPSSRVFGRGELVIDPAQIAKRYL
QQYFIVDFLSVLPLPQIVVWRFLYTSTGGSVLETKQALRSIILVQYIPRFIRIYPLSKEL
KRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLALERVNGCWKKACLVDGQNCTRNF
LFCGNENMDGYAAWNTIKESVLQKSCPVNVTDGDNPPFDFGIYLRALSSGIVSSESFVAK
YFFCLWWGLQNLSTLGQGLETSTYPGEIIFSIALAVAGLLLFALLIGNMQTYLQSLTIRL
EEMRVKRRDSEQWMHHRMLPPDLRERVRRYDQYKWLETKGVDEENLVQNLPKDLRRDIKR
HLCLALVRRVPLFENMEERLLDAICERLKPCLYTEKSYLVREGDPVNEMLFIIRGRLESV
TTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADE
LKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRYVKKKKLEQLKKEEEEEGE
GHVASIRATFLASKFAANALRKVHQNRIAAKSTKELVIFQKPSEPDFSADDP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggattctagatactcgcagggcgctgaagcaggtctcaacaaatgcacactcaatctc
caaggaccatcacgtgctaatggtgctggccaaggcaacaacaacaatgcatcatctggt
tcctttaagaaaggttttagaagaggctccaaagggctctggtctctaggaagatcgatc
ggtctcggcgtttcgcgagctgtgtttccagaagatctcaaagtatctgaaaggaagata
tttgatccgcaggacaagtttcttttgctatgcaacaagctctttgtcacttcttgcatc
ctcgctgtgtcagtggatcctctcttcttgtatcttccgtttattaatgatagcggcaag
tgtatcggcattgaccggagattggctaccattgcaacaacgctgaggactttcatcgat
gtgttttatcttttccggatggctctgcagtttaggacagcttttgtggctccttcttct
agggtttttgggagaggcgagcttgtgattgatcctgcacagatagctaagcggtatctg
cagcagtacttcatcgttgactttctttctgtgcttccacttccacagattgtagtttgg
agatttctctacacatctacaggtgggagtgtgttggaaacaaagcaagcgttacgttcc
atcattttagttcagtatattccgcggtttattcggatatatcccttaagcaaagagctc
aagagaacagctggggtgtttgctgagacagcttgggctggtgcagcttattacttgcta
ctctacatgcttgctagtcatattgttggggcgttatggtacttactggctttagaacga
gtcaacggttgctggaagaaggcttgtcttgttgatggccagaactgtaccagaaacttc
ctgttttgcggtaatgaaaacatggatggttacgctgcttggaacactatcaaagagtct
gttcttcagaaaagttgtcctgtcaatgtgactgatggtgacaatcctccttttgatttt
ggaatctacttaagagccttgtcttctggcattgtctcgtctgagagctttgtagctaaa
tacttcttctgtttgtggtggggacttcagaatctcagcacacttggtcaagggcttgag
acgagtacataccctggagagatcatattctccatagcactagctgttgctgggcttcta
ctctttgctcttctcattgggaacatgcagacttatctccagtcactcacaatccgcctt
gaggagatgagagtgaagagacgtgactcagagcagtggatgcatcaccggatgcttcca
ccagacctgagagaacgggtcagacgttatgatcagtacaagtggttggagacgaaagga
gtcgatgaagagaatctggttcagaacctcccaaaggatctgagaagagacatcaaacgc
catctctgtcttgctttggtccgaagggttccattgtttgagaatatggaagagaggctg
cttgatgcaatatgcgagaggttgaagccgtgtctatacacggagaaatcttacctggtc
cgtgaaggtgaccctgtcaacgagatgctcttcattatccgtggccggctcgagagtgtg
acgacagacggtgggagaagtggtttcttcaaccgtagtttgctcaaagaaggagacttc
tgtggagaagagcttttgacgtgggcgcttgatcccaagtccggctccaacctaccttcc
tccacaagaaccgcaaaggctctaacagaagtggaagccttcgctttgatagctgatgag
ctcaagttcgttgctagccagttcaggagactgcacagcaggcaagttcagcatactttc
agattctactcgcagcaatggaggacttgggctgctatttttatacaagccgcgtggaga
cggtacgtgaagaagaagaaacttgagcagcttaagaaggaagaggaggaagaaggagaa
gggcatgttgctagcattagagctacgttcttggcttctaagtttgcagcgaatgcgctt
cgtaaagttcaccagaaccgtattgcagcaaagtctactaaagagcttgtgatttttcag
aagccttctgaacctgatttctctgctgatgatccttaa
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