Brassica rapa (field mustard): 103862009
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Entry
103862009 CDS
T03449
Name
(RefSeq) nuclear pore complex protein NUP43
KO
K14305
nuclear pore complex protein Nup43
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103862009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103862009
03036 Chromosome and associated proteins [BR:
brp03036
]
103862009
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103862009
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103862009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
WD40
Motif
Other DBs
NCBI-GeneID:
103862009
NCBI-ProteinID:
XP_009137972
UniProt:
M4E5I6
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All DBs
Position
A03:complement(29455769..29457960)
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AA seq
353 aa
AA seq
DB search
MEMHDSLQIHRLPQSKYVDGVRWLPQASALNRFFAAAFHDPDSESSSIEIQSLDPNPNNI
PSVVSLSSWTSPSRVSSLEVVGGGSFKPMVSAATSSGSVHVLMVDLVEGGVIGEVYAAEG
ERFHVGRVEGVDWREGGECVTVGDDGRVNVVTVVNGGEGLRYRRVFDGNGLVGYRAVKWA
SPCEFVTGGYGFGLQLWDQRKSGEAVSQLKGSWFQGKTSAVVHSIDIHPSRKHTCIAGGS
SGTVFAWDLRWPKQPIVLSGVGASEGVNNPLSESEVWEVQYDSYTKSNISSSRILPVMTC
SEDGILGVIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFSRP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcacgattcgttacaaatccacagattaccacaatcgaagtacgtagacgga
gtcagatggctcccacaagcctccgccttgaaccgtttcttcgcggcagccttccacgac
ccagactccgaatcttcatcaatcgagatccaatctctcgacccgaacccgaacaatatc
ccctcggtcgtgtcgttatcctcatggacttcgccttctcgcgtttcgtcgctcgaagtc
gttggcggcggctccttcaagcctatggtctccgccgccacgtcatccggttcggttcat
gttctgatggttgatttggtggaaggaggtgtgattggagaggtttacgcggcggagggg
gagaggtttcatgtgggacgcgtggagggtgtggattggagggaggggggagagtgtgtg
acggttggggatgatgggagagtgaatgtggtgacggttgtgaatggtggtgaagggttg
aggtataggagggtgtttgatgggaatgggcttgtgggttatagagctgtgaagtgggct
tctccgtgtgagtttgttactggtgggtatggttttggtttgcagctgtgggatcagagg
aagtctggtgaagctgtctcgcagctgaaagggagctggtttcaaggcaaaacctcggcg
gttgtccactccattgacattcatccatcgcgaaagcacacttgcattgcgggaggttct
tctggtactgtgtttgcttgggatcttcgctggcctaaacagcctatcgttctctctggt
gttggtgcaagcgagggtgtgaacaatcctctgtctgaaagtgaggtatgggaagttcag
tatgactcatacacaaagtccaacatctcgtcctcaaggattctccctgtcatgacctgc
tccgaagacggaatccttggcgtcatcgagcaaggggaagaaccgattgagcttctggct
gaaccttgtgccattaacagttttgacatcgacagacagaatccacaggatgtgatatgt
agcttagagtgggagtcaatagcagtcttctcaaggccttag
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