Brassica rapa (field mustard): 103862012
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Entry
103862012 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103862012
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103862012
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103862012
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103862012
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103862012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103862012
NCBI-ProteinID:
XP_009137977
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All DBs
Position
A03:complement(29463734..29466509)
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AA seq
559 aa
AA seq
DB search
MTRLLRCELSSTLHLLSLFCSWEVFLFGSFTEHETKSLIEHNKPIRSPHNHKEKSVESIQ
FGSFYLATDNSSVNTNGPLKKGQADGAVKSRPSSSQSAGSQKGLDASTPSTSDKISDTEV
NGIIKEVSERKPLTNGVAVKADPIGLGKLCVSDAESDSLYKASSSKFQALEDSEILLSDS
SSNSVPRKSKQMVATETPLPIKKELTPRGLINAGNLCFLNATLQALLSCSPFVQLLQRVQ
FQDIPKAESPTLSAFSEFISELDAPSSSSFRNNVAVVESSRPFTPAMFEGVLRNFTPDVL
NNMSGRPRQEDAQEFLSFIMDQMHDELLKLREVSPKLTASKSSVVTFVDDDDEWETVGPK
NKSAVTRTQSFVPSELSDIFGGQLRSVVKAKGSKDSATVQPYLLLHLDIHQGAVRTIEDA
LHLFSAPEDLEGYRASVTGKAGAVSARKSIKIQKLSKIMILHLMRFSYGNQGSTKLHKPV
HFPLELNLGRYVLVSPSNGGYELVATITHHGRDPSKGHYTTDARRKNNQWLRFDDASVTT
IGTKQVLHDQAYVLFYKQV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgactaggctcctaagatgtgaactctcctctaccttacacttgctatccttattttgt
tcatgggaggtatttttgtttggatcttttacagaacatgaaacaaagtcgttaattgag
cataataaacccattaggtctcctcacaaccataaagaaaagtctgtagagagtatacag
ttcggctccttttatcttgctaccgacaattcttcagtaaacactaatggcccgctgaag
aaaggtcaggctgatggggcagtgaaatctcgaccctccagctctcagtctgctgggtct
caaaagggactcgatgcttctacaccttcgacctctgataagatcagtgatacagaagta
aatgggattattaaagaggtctctgaaagaaaacctcttaccaatggcgtggcggtgaag
gcagatcctataggtttggggaagttgtgtgtgtcagatgctgaaagtgactctttgtat
aaagcttcgagctcgaaatttcaagccctggaggacagtgaaatattgttaagtgattct
tcatctaacagcgtaccaagaaagagcaaacagatggttgctactgaaactcctctgccc
attaaaaaagaacttacaccaagaggattaataaacgctggaaacttgtgcttccttaat
gcaacgcttcaggctttactctcatgctctccttttgtgcagctcctccagagagtacaa
ttccaagatattccaaaggctgagtctccaactctatctgcattctcagagtttatctct
gaactagatgcgccaagcagttcaagtttcagaaacaatgtcgccgttgttgagtctagt
agaccctttacacctgccatgtttgaaggggtccttagaaacttcacaccagatgtactc
aacaacatgtctggccggccaaggcaggaagatgctcaggagtttttgagctttataatg
gaccaaatgcacgatgagctgctgaaactcagggaagtgtcacccaaacttactgcttcg
aagtcatccgttgttacttttgttgacgacgatgatgaatgggaaacagttggacccaag
aacaaatctgctgtgacgagaacacaaagctttgttccttctgagctcagtgatatattc
ggtgggcagctaagaagcgtagtgaaagcaaaagggagcaaagattctgctactgtacag
ccatatctcttacttcaccttgatattcaccagggagcggtgaggacaatagaagatgcg
ttgcatttgttttctgcaccagaggatcttgaagggtatcgagcctcggttactgggaag
gctggtgcagtgagtgctagaaagtcgataaagatacagaaactctcgaagataatgata
ctgcaccttatgcgttttagctacggaaaccaagggagtactaagctccataaacctgtt
cactttccccttgagctcaacctaggccgctatgttcttgtttctccttccaacgggggt
tatgaacttgtggcaactattacacaccacggaagggatccttcgaaagggcactacacc
acagatgctcgaagaaagaacaatcaatggcttaggttcgatgatgcatctgttactacc
atagggacaaaacaggttttgcacgaccaagcctatgttctgttctacaaacaagtgtaa
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