Brassica rapa (field mustard): 103862224
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Entry
103862224 CDS
T03449
Name
(RefSeq) myosin-15 isoform X1
KO
K10357
myosin V
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
103862224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103862224
04131 Membrane trafficking [BR:
brp04131
]
103862224
03029 Mitochondrial biogenesis [BR:
brp03029
]
103862224
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
brp04812
]
103862224
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
103862224
mRNA cycle factors
P-body specific factors
103862224
Membrane trafficking [BR:
brp04131
]
Others
Actin-binding proteins
Myosins
103862224
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
103862224
Cytoskeleton proteins [BR:
brp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
103862224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Zeta_toxin
TRPM_tetra
Tropomyosin
TSC22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103862224
NCBI-ProteinID:
XP_009138169
LinkDB
All DBs
Position
A03:complement(30391503..30404006)
Genome browser
AA seq
1522 aa
AA seq
DB search
MESNLRRGDKVWVEDKDSAWAAGEVLDSPGNKVHVETSTGKQVFVCSEKVFRRDPDEEDR
NGVDDMTKLTYLHEAGVLYNLQRRYALNDIYTYTGSILIAVNPFKKLPHLYNGYMMEQYK
GAPFGELSPHVFAVSEVAYRAMIDDRRSQSILVSGESGAGKTETTKLIMQYLTYVGGRAA
EDNRSVEQQVLESNPLLEAFGNAKTVRNDNSSRFGKFVEIQFDANGRISGAAIRTYLLER
SRVVRITDPERNYHCFYQLCASGSDAKKYKLSNPHQFHYLNQSKTYDLEGVSNAEEYKNT
RRGMDIVGISHDEQESIFRTLAAILHLGNVEFSSGKEHDSSVVKDQESRNHLQMAADLFR
CDANLLLASLCTRSILTREGTIIKALDCNAAVTSRDALAKTVYARLFDWLVDKINRSVGQ
DPNSHFQIGVLDIYGFECFKSNSFEQFCINFANEKLQLHFNEHVFKMEQDEYRKEEINWS
FIEFIDNQDVVDLIEKKPIGVIALLDEACMFPRSTHESFSMKLFQNCKSHPRLEKTKFSE
TDFTLSHYAGKVTYQTETFLDKNRDYTIVEHCNLLSSSRCPFVAGLFASAPEESARSSYK
FSSVSSRFKQQLQALMETLSKTEPHYVRCVKPNTLNRPQKFENLSVLHQLRCGGVLEAVR
ISLAGYPTRRYYSDFVDRFGLLAPELMDESNDEQALTEKILRKLGLGNYQLGRTKVFLRA
GQIGILDSRRTEVLDASARLIQRRLRTFVTHQNFIAARACAISIQAYCRGCLSRNAYVAR
RNEAAAVLVQKHARRWLSRCAYVKLVSAASVIQSCIRADSARLKFAHQKEHRAASLIQAR
WRVHKFHTAFRHRQSSIIAIQCCWRQKLAKRESRKLKRAANEAGALRLAKTKLEKRLEDL
EWRLQLEKRLRTSGEEAKSGEISKLQKTLESFSLKLDAARLATINECNKNAVLQKQLDIS
MKEKAAVERELNGMVELEKDNTSLKNSMNSLEKKNLSLEKELLSAKTDCNNTLQKLKEAD
NRCSELQTSVQSLEEKLSHLENENHVLRQKTLRISPERIGRMLGESPQQKHSSDVVPAQI
DRTSVFETPTPSKRIMPFSRSLSESRRPKFTAERNVDIHELLSRCIKENLGFNDDKPLAA
CVIYTCLLHWHAFESESTAVFNIIIEGINEALKVGDENSVLPYWLSNTSALLCLLQRNLR
TNSFLNASVQRSGRAASGVKSPFKVNGPDDGVPHIEARYPAILFKQHLTACMEKIYGLIR
DNLKKELAPLLGLCIQAPKALRGTAGKSSRSPSDVPQRSPSSQWENILKFLDSLMSRLRE
NHVPSFFIRKLVTQVFSFINLSLFNSLLLRRECCTFSNGEYVKSGITELEKWISGVKEEF
SGTSWHELSFIRQAVGFLVIHQKRRKSLDEISQDLCPALTIRQIYRISTLYWDDKYGTQS
VSSEVVSQMRVLVDKDSSQKLTSNSFLLDDDMSIPFSAEDIDKAIPVLDPSEIEPPKFVS
EYTCAQSLVKKPSATSVSKQIL
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaatctgcggaggggcgacaaggtttgggtggaggataaggattcagcttgg
gctgccggtgaagtgctcgattctccgggaaacaaggtccacgtcgaaacttccaccgga
aaacaggttttcgtctgctcggagaaggtgtttcgtagggatcccgacgaggaggatcgt
aatggagtggatgatatgactaagctgacgtacttgcacgaggctggtgtgctttacaat
ctacagaggagatacgctctcaatgatatctacacatacactggaagcattctgatcgct
gttaatccgtttaaaaagcttccacatctctataatgggtacatgatggagcagtacaag
ggagcaccattcggtgagctcagtcctcatgtttttgctgtttctgaagttgcatacaga
gcgatgattgacgacaggcgaagtcagtctatactcgttagcggtgaaagtggagctgga
aaaactgagacaactaaactaatcatgcagtatcttacatatgttgggggacgtgctgct
gaagataatagaagtgttgagcagcaagtccttgaatcaaatcctctcttggaagcattt
gggaatgcgaaaacagttagaaacgataattccagccgttttggcaagtttgtggaaatc
caatttgacgcaaatggtagaatatctggtgctgcaatcagaacctatcttctggagaga
tcacgtgtagtccggataacagaccctgagaggaactatcactgtttctaccagctttgc
gcttctgggagtgacgctaaaaaatacaaactaagcaatccacatcaatttcattatctc
aatcaaagcaaaacctatgacctggagggagtaagcaacgcagaagagtataagaataca
aggaggggcatggatattgtgggcataagtcacgatgagcaggaatcgatattccgcacg
cttgctgccattctgcatcttggaaatgttgagttttcatcgggaaaagagcatgattct
tctgtagtaaaggatcaggaatctagaaatcatctgcagatggctgctgatcttttcagg
tgtgatgcaaatcttttactggcttctctctgcacacgttcaattctgacccgtgaaggt
accataatcaaagcacttgactgtaatgctgctgttactagccgggatgcactagcgaag
actgtttacgcccgtctgtttgactggttggttgataagattaataggtctgttgggcaa
gatccaaactcccattttcaaataggagtcctggacatttatggctttgaatgctttaag
agtaacagttttgaacaattttgcatcaattttgcaaatgaaaagcttcagctgcatttc
aatgagcatgtatttaagatggagcaggatgagtacagaaaagaagagattaattggagt
tttattgagtttattgacaatcaggatgttgtggaccttatagagaagaaacctattggg
gtaattgcactcttggatgaagcttgcatgtttcctagatcaacacatgagtcattttca
atgaagctgttccagaactgtaaatctcatccaagattggagaagacaaaattttcagag
acggactttactctctctcattatgctggcaaggttacgtaccagactgaaacctttctg
gataaaaatcgtgattatactatagtggagcactgcaatctgttatcttcctcacgatgc
ccctttgttgctggactttttgcctccgcgccagaggagtctgccaggtcttcttacaaa
ttttcttctgtgtcttccagatttaagcaacaacttcaagccctcatggaaactctcagc
aaaacggagcctcactatgttcgttgtgtgaagccaaacacactcaacagacctcaaaag
tttgagaatcttagtgttttacatcaacttcgttgtgggggagtactggaagctgttcgg
attagtcttgcagggtatcccacacgaaggtattattcagactttgtggatcggtttggt
ctgttagccccagaactcatggatgagagcaatgatgagcaggcgcttaccgagaaaatc
ttgcggaagttaggtctggggaattatcagttaggaaggacaaaagtgttccttagagct
ggtcaaattggcattttggactctaggcggactgaagttcttgatgcttctgcaagactc
attcagcgaagactaagaacatttgttacgcatcaaaacttcatcgctgcccgggcttgt
gcaatttctatccaagcatactgtagagggtgcctgtcccgaaatgcctatgtcgccaga
aggaatgaagcggcagcagtattggtacaaaagcatgcgcgcaggtggctgtcaagatgt
gcatatgtgaaacttgtatcggctgcatcagtaatacagtcttgcatccgtgctgactca
gctcgtttaaagtttgctcatcagaaagagcacagagctgcttctctgattcaggctcgt
tggagagtgcataagtttcacacagcattcaggcaccgccaatcttctattattgctata
caatgttgttggcggcagaagcttgcgaagagagagtctagaaaacttaaacgggctgct
aatgaagcaggtgctttgcgattagcaaaaactaaacttgagaagcgattagaagatctt
gaatggcggttgcagcttgagaaacgattgcgaaccagtggtgaggaggccaagtcaggt
gaaatatccaagcttcagaaaacattggaatccttcagcctcaaactagatgcagctagg
ctggctaccattaatgagtgcaataagaatgcagtacttcaaaagcaactagacatatcc
atgaaggagaaagctgctgttgaaagagaacttaatggaatggttgaactggaaaaagat
aacacttctttgaagaattcgatgaattccttggaaaagaagaatctgtctctggagaag
gagcttctcagtgctaaaacggattgcaataatacactacagaagttgaaggaagctgat
aatagatgttctgaactccagacaagtgttcaaagcctcgaggagaaactctctcacctg
gagaacgagaaccatgtcttgaggcagaagactttaaggatatccccagagagaatagga
cggatgcttggtgaatctcctcaacagaaacactctagtgatgttgtaccagctcagatt
gacaggacatctgttttcgagacacccacaccttcaaaacgcatcatgccattttcacgt
agcctgtcagagtcacgtcgacccaaattcactgcagaaagaaacgtggatatccacgaa
ttgctctccagatgtatcaaggaaaatttgggattcaatgatgataagcctttggctgct
tgtgtaatatacacatgtcttctgcactggcacgcctttgaatctgagagcacagccgta
tttaacatcattatcgagggaattaatgaagcccttaaggttggagatgaaaacagtgta
ttaccatattggctttcaaacacttcagcacttctatgcctcttgcagagaaatctacgg
acaaatagttttctaaatgctagtgttcagcgttctgggagggcggcatctggagtaaag
tctccttttaaagttaatggacctgacgatggcgttccgcatatagaagcaagatatcca
gcaatattgtttaaacagcatctgacagcatgcatggagaagatttatggtctaattcgt
gataatttgaagaaagagttagcaccgcttcttggattatgcattcaggcacccaaggct
ttacgaggaactgctggaaaatcctctagatcaccaagcgatgtgccgcagcgatcacca
agtagtcaatgggaaaatatacttaaattcctggattctcttatgtcccgcctacgagaa
aaccatgtaccctcgttcttcatacgcaagcttgtgactcaggttttctcatttatcaat
ctctcacttttcaacagtctcctccttcgacgtgaatgttgcacattttcaaatggggaa
tatgtgaaatctgggattacagaattggagaagtggatatccggtgtcaaggaggagttt
tcaggaacatcttggcacgagttaagtttcattagacaagctgttggattcttggttata
caccagaaaagaagaaaatcgctggatgaaatcagtcaggatctatgcccggcattgaca
ataaggcaaatatatcgaataagtacgctgtactgggatgataaatatggaactcaaagt
gtctcaagcgaggtggtttctcaaatgagggtacttgttgacaaggatagcagccaaaaa
ctaacatcgaattcattcttgctggatgatgatatgagcattcctttctcggcagaagat
atagataaggctattccagttttagacccatcagagatagaaccaccaaagtttgtatca
gaatatacttgtgcacagtcccttgtgaagaaaccctccgcaacttcagtctcgaagcag
atcctttga
DBGET
integrated database retrieval system
