Brassica rapa (field mustard): 103862416
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Entry
103862416 CDS
T03449
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103862416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103862416
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103862416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103862416
NCBI-ProteinID:
XP_009138371
LinkDB
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Position
A03:31581915..31588481
Genome browser
AA seq
1186 aa
AA seq
DB search
MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVVTCSVKVVDDG
CGVSRDDLVLLGERYATSKFHDFTNVETASESFGFRGEALASISDISLLEITTKAVGRPN
GYRKVMKGSKCLHLAIDDDRKDSGTTVTVRDLFYNQPVRQKYMRSSPKKVLESITKCSFR
IALVHSDVSFSVLDIESDEELLQANPSASAFSLLMSDAGTKALNSLCKVDVTDGLLNVSG
YISGPRDSFKALQYIYINSRFVSKGPIHKLLNNFAASFDSTDDWKPTDGLQTGRRNRLQP
CPGYILCITCPRHLYEFSFEPSKTNVEFKNWEPILTLIERIVLANWKKDEGLEVCDGGAD
LLAKGDRQDLIDDMGRLEKDAEWPETMEPTKKKLKRSNDETPSSFLFPPSADFKRDDGYL
SQGKEEWSPKYEFGMKIQNLKEQDTVAEFDRQTASLLQSRDTDMQKNEDFPQVPDFLETR
FVSGAKCSKQFLTRCQTSTPLNVNHGFMKDADVLNFQFEEVEDELDVSNCIGKHLLRGCS
SRESLALHEPNLSRGEGYESGMRMKLDDKRSNSLIHVLETREGGSYCDFLSDTHEIHGMT
RTPDCSLGSSWQDTDWFNPQHISDSTSVGIGEDFNINPVDIVEFRSYEDKFVKKRYSSSA
NVGRSGPGSYRLRSECSTVFSTSPSTAEWESDYQKGCQILEGSLKLGRMPDPGYFFSPAN
NFKFDHEAIPQIGCRKTSTDSFADMQNCTESGEKIFQSLWGHADNVGTEQHSTRTNKFSY
RYGSKNNVGKRRSRRSRSAPPFYQEKKRFVSLSCRSDTKLKNSDPSEPDDLECLTQPCNG
SILDDVSYDHLQEPGKSMSSASDLKASAGCSIVHSETRDEDGDEDLSSEENLDPVKSTTK
WRHNCPVPQVAKESHELHDQDSVLDICSGLLHLRSDESLVPESINRQSLEDAKVLQQVDK
KYIPIVACGTVAIVDQHAADERIRLEELRKKVLAGEARTVTYLSANQELVLPEMGYQLLQ
SYSDQIREWGWICSINVEGSTSFKKSMSIIQRKPTPITLNAVPCILGVNLSDVDLLEFLQ
QLADTDGSSTIPPSVLRVLNSKACRGAIMFGDSLLLSECSLIIEGLKQTSLCFQCAHGRP
TTVPLVDLKALHKQITKLEPRQPWHGFEHREITLDRAKSRVDEAKS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatcaagcccttaccggaaggtgtccgtcactcgatgcgatccggaatcatc
atgttcgacatggcgagagtcgtggaggagctcgtcttcaacagtctcgacgctggtgcg
accaaggtgtctatcttcgtgggtgttgttacatgctctgtgaaggttgtcgatgatgga
tgtggcgtttccagagatgatttggttttgttgggagaaagatatgctacgtcaaagttt
cacgactttacaaatgtggagacagccagtgaaagttttggattcagaggagaggcctta
gcttcgatatcagatatctcgttgctggaaatcacgactaaagctgttgggaggcctaat
ggttatcggaaggttatgaagggatccaagtgtctacatctagcaattgacgatgataga
aaagactctggcacaactgtaactgtccgagatctgttttacaatcaaccagtgagacaa
aaatatatgcgatccagccccaagaaagtgttggaatctataacaaagtgttcgttccgg
attgcgctcgtgcactcggatgtttccttcagtgttcttgatatcgaaagtgacgaagag
cttctccaagccaatccttctgcttcagcattttctctactgatgagtgatgcagggact
aaagcgttaaactctctttgtaaagtagacgttacagatggcctgttgaatgtctctggg
tatatatctggtcctcgagatagtttcaaggctttgcagtacatatatatcaattcaaga
ttcgtaagcaaaggtcccatacataagctgctgaacaacttcgctgctagttttgattct
acggatgactggaagcctacagatgggctacaaacaggacgacgtaacagacttcaaccc
tgtcctggttacatactgtgcataacatgtccacgtcatctttatgaattctcatttgaa
ccatcaaagacaaacgttgagttcaagaactgggaacctatacttaccttgatagaaaga
atcgttctagccaattggaagaaagatgagggtcttgaagtttgtgatgggggagctgat
ctgctggcaaaaggtgatagacaagacctgattgatgacatgggtagacttgaaaaagat
gcagagtggccagaaactatggagcctacaaaaaagaagctcaagagaagtaatgatgag
acaccttctagttttctctttcccccgtctgctgacttcaaaagagatgatggttatttg
tcgcaaggaaaggaggaatggtctccaaaatatgaatttggaatgaaaattcagaatctt
aaagagcaagacactgtagccgaatttgaccgtcagactgcttctcttctacagtcacgt
gacacagatatgcaaaagaatgaagactttccacaagttcctgacttcctagaaacaaga
tttgtttctggcgctaagtgcagcaaacagtttctaacaagatgccaaactagcacacct
ctcaatgtcaaccatggttttatgaaagatgcagacgtattgaattttcagtttgaagaa
gttgaagatgagttggatgtcagcaattgcattggaaagcatcttttgcggggttgctcc
tcaagagaaagcctagcccttcatgagcctaatctatctcgtggtgaagggtatgaatca
ggcatgcgtatgaaacttgatgacaaacgaagtaattcactgattcatgtcctagagacc
agagaaggtggttcttactgtgattttctttctgatactcatgaaattcatggaatgacc
aggactcctgattgttccctagggagttcatggcaggatactgattggtttaatccacaa
catatctcagatagtacaagcgttggaattggagaagattttaacatcaaccccgtagat
attgtggaatttcgttcttatgaagacaaatttgtgaagaaaaggtactcttcctcagcc
aatgtcgggaggtctggtcctggtagttaccgtttgaggtctgagtgctctacagtgttc
tccacatctccttctacggccgagtgggagtctgattatcagaaaggttgtcaaattctt
gaagggagtttgaaactgggaaggatgcctgaccctgggtattttttcagtccagctaac
aacttcaaatttgatcatgaggccatacctcaaatcggttgccgaaaaaccagcacagat
tctttcgcagatatgcagaattgcactgagtcaggtgaaaagattttccagtcattgtgg
gggcatgcagataatgtgggtactgaacaacatagtaccaggacgaacaaatttagttat
aggtatggttcaaagaataatgttggtaaacgaaggtcaagaagaagccgctctgctcct
ccattttatcaagagaaaaagagatttgtcagtttaagttgtagatcagacacaaaattg
aagaattctgatccatcagaacctgatgatttggagtgcttgacacaaccctgtaatggc
agcatccttgatgatgtgtcatatgaccacctacaagaaccagggaaaagtatgagttcg
gcctcagacttgaaagcatctgctggttgcagtattgtgcactcagagacccgagatgag
gatggagacgaagacttaagctctgaggaaaatctggatccagttaaatccacaacgaaa
tggcgccataactgtccggtccctcaggttgcaaaggaatcacacgagcttcatgatcaa
gatagtgtactcgatatatgttcaggacttttgcacctgcgatccgatgagtccttggtt
cctgaatctataaacagacagtcccttgaagatgccaaggttttacaacaagtggataaa
aaatatattccaattgttgcttgtggaacagttgccatcgttgatcagcatgctgccgat
gaaagaattcgcttggaagagctgcgtaaaaaggtcctggcgggggaagcaaggacagtc
acctatttgagtgcaaaccaagagttggtcctaccagagatgggttatcagttactccag
agttactcagaccagataagagaatggggttggatctgcagcattaatgtagaagggtca
acgtcctttaagaagagcatgagcatcattcagcggaaaccaactccaatcacacttaat
gcggtcccatgcattctgggtgtaaatctatcagatgttgatctactagagtttcttcag
cagcttgctgatactgacggatcatcaacaattcctccatctgttcttcgagtcctgaac
tccaaagcatgtagaggtgcaattatgttcggagattctctgttactctcggaatgctct
ttaatcatcgaaggattaaagcagacctcactgtgtttccagtgtgctcatgggcgacca
acgacagttcctctagtcgatttgaaggcattacacaaacagataacaaagctcgaacca
agacaaccgtggcatgggttcgaacatagagaaatcacacttgatcgtgccaagtcacgc
gtagatgaagctaaaagctaa
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