Brassica rapa (field mustard): 103862482
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Entry
103862482 CDS
T03449
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103862482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103862482
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
103862482
Prokaryotic type
Archaeal type
TFB
103862482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
103862482
NCBI-ProteinID:
XP_009138438
UniProt:
A0A397L6G7
LinkDB
All DBs
Position
A03:complement(31978900..31982739)
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AA seq
502 aa
AA seq
DB search
MKCPYCSSAQGRCATTTSGISITECTSCGRVVEERQTQNHHLFHLRAQDTPLPLVTPDLQ
PPAAQPSPPDEEDPFEPTGFITAFSTWSLEPSPIFARSSLSFSGHLAELERTLELASSGS
NSSSTVVVDNLRAYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATACL
VQAIREAQEPRTLQEISIAANVQQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLL
QLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTE
VTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTISTARSTTPRAVDPPEPSLADRDK
PSVKPIETSDHAHQQQEQPKGKEEKHPKFRQPWLFGTASVMNPGEMISEPVKSPNAPDFD
KQQLSDKDTLPTYLRQHNQFTSSSSPSSGISTINWSFRPSGGNGSSSNLPVVHPPKLPPG
YAEIRGSGSQSGNKNANHPHGD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtccgtactgttcatcggcgcaaggacggtgcgccaccacgacctccggcata
tcgataaccgaatgcacctcatgcggccgcgtagtcgaagaacgccaaacgcaaaaccac
cacctcttccatctccgcgcgcaagacactcctctccccctcgtcactcccgatctccaa
ccccccgcggcgcaaccgtctccacccgacgaggaagatccgttcgagcccaccggattc
atcacggccttctccacctggtcactcgagccgagccccatcttcgctcgctcctccctc
tccttctccggccacctcgcggaactcgaacgaaccctggagctcgcctcctccggatcg
aattcgtcgtcgacggtggtggtggataaccttagggcttatatgcagatcatcgacgtg
gcgtcgattttgggattggattgcgatatctctgagcatgctttccagttgtttagggat
tgctgctcggctacttgcttgaggaacagaagcgttgaggcgttggctactgcttgtctt
gttcaagctattagagaagctcaggagcctcgaactcttcaggaaatctccattgccgcc
aatgtacagcagaaggaaattggaaagtacatcaagattttaggagaagctctacaacta
agtcaacccatcaacagcaactctatatcagttcatatgccaagattctgcaccctcctt
cagcttaacaagtctgctcaggaactggcaactcatatcggagaagtggtgatcaacaag
tgcttctgcacccggagaaaccccatcagcatatctgcagctgctatctatctagcatgt
cagcttgaagacaaacgaaagacacaagcagagatttgcaaaataaccggattaacggaa
gtaaccctgcgaaaagtctataaggagcttcttgagaactgggacgaccttctcccatct
aactacacaccagccgtcccaccagagaaagcattccccacaaccacaatctctacggcc
cggtcaacaactcctagagccgtggatccacctgaaccgagtttagcggatagagacaag
ccatcggttaaacccattgaaacttctgatcatgcccaccaacaacaagaacaacccaaa
ggcaaagaagagaagcatcctaaattcagacagccttggctgtttggaactgccagtgtg
atgaacccaggggagatgataagcgagccggtgaaatcacctaatgctccggactttgat
aagcagcagctcagtgataaggacacactgcctacatatctcagacaacataaccagttc
acttcgagttcatctccatcttcaggtatcagcacaatcaactggtcgttcagaccttct
ggtggcaacgggtcctcaagcaacttgcctgttgttcatccgccgaagctgcctcccggt
tatgctgagatcagaggtagtggatctcaatcaggaaacaagaatgctaatcatcctcat
ggagattag
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