Brassica rapa (field mustard): 103862900
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Entry
103862900 CDS
T03449
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103862900
03012 Translation factors [BR:
brp03012
]
103862900
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103862900
mRNA cycle factors
Stress granule specific factors
103862900
Translation factors [BR:
brp03012
]
Eukaryotic type
Initiation factors
eIF-4
103862900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
103862900
NCBI-ProteinID:
XP_009138861
LinkDB
All DBs
Position
A04:complement(1200803..1207174)
Genome browser
AA seq
1657 aa
AA seq
DB search
MSYNQPRPSDNQQYRRTGRSAGYQQQQQQQQPHRSSAAGYGRGAGAGAGPAPASSATVDP
SNRSFKKAQGGGQQHQHQPRVNLPPVNHHSNNHNGPPNVQSRSQGASGEPVIGGPGNSIS
GAIPKAPTSQSPAVNSKSNEAQNTAKPVSGDPSKAFAFQFGSLGPDLMKIPARTSSAPPN
MDEQKRAQMQQASLKAAPNVPVSVPKNNSPNKAADNQVMRKEGRNPSSDKADVQVHHMSP
LSQTHKSPITHIRMPSVQTPYQQHPQVPHPVHFGAPPNMHMQPPNVAPTSFQMPMPMGLP
MGNTPQIQQQVFFQGLPSHPMHHQGMMHQAQGHGFAAPMGAQIHPQMGHVGVGMSPQYPQ
QQGGKYGGGRKTTPVKITHPDTHEELRLGGRGDPHQDGQPQGPKSHPNTPPRSHPVSAFA
PRPLNVIQTSFNTSPMIYPPASVPFNSGPMSSAQAPRFQFPVVDGSQRVQFTNQSAHTAP
HVSSDSSSVKAHVTSSAFPAPGRVTVKQAATSEKLESPKARSHEETNVALSQKKAETGLL
DSLQQPKPGSVSALSNSSAPPAKAPVETVTVATTTIGSVQIVNESSSVEDQTQTCKVEPS
HNATEVHGQTPVSDLETKAIAAKENSRLPATNGLEKQNVPASDAPDTKIDKTAEDLNCDE
RTISGKQVEESVISDEKLETVSGVLEKAHNEVDGATDISSDSEKVAKVADDTNSELPHST
HTQSSTVPVGHSSNSLTSAPASLSKDKPAFESNIRRTTSTKGRKKIKEIYQKADAAGTTA
DLYMAYKGPEEKKEIAMPSESSDVSNEKLAPAIPQDVVEATMDAEPVKNEPENWEDAADV
STPKLESVQGKPGSADEVRDGCSNTEKKYSRDFLLKFADMFTALPEGFDVSPDIANALIF
VNTGAPHHEHGKVMDRQGSSGRRPSNMIDDRWAKNQGSLPSGHGGNAGFRTGQGGNSGVL
RNPRMQQGPIMSRPMQPVGQMGGMGRNNDLDRWQRGSNFQQKGLFPSPHTPMQVMHRAER
KYQVGTVTDEEQAKQRQLKGILNKLTPQNFEKLFEQVKNVNIDNVVTLTGVISQIFDKAL
MEPTFCEMYADFCVHLSGALPELNEDGEKVTFKRLLLNKCQEEFERGEKEEEEASRVAEE
GQVEQTEEEREEKRLKVRRRMLGNIRLIGELYKKRMLTEKIMHACIQKLLGYDQDPHEEN
IEALCKLMSTIGVMIDHSKAKVHIDAYFDRMKMLSGKEELSSRVRFMLINAIDLRKNKWQ
ERMKVEGPKKIEEVHRDAAQERQTQAKRLSRGPSMNVSGRRGHMEYSPRGGGGMLSPPSA
QMGGYHGPSQGRGYNNNQDIRFDERSAPAYEPRMVPMSQRSVGEEPITLGPQGGLGQGMS
FRKPAVLSNTLQSDPRRPAGGLNGVGSQRPASPVTHGRSSPQERGSTYVHREFSRASEPS
SEVSSARQVPQGPSSAVNSPRENLLSEERLQDMSLSAIKEYYSARDEKEIGLCMKDINSP
AFHPTMISLWVTDSFERKDKERDLLAKLLVNLVKSADNVLTEAQLVKGFETVLTTLEDAV
NDAPKAAEFLGKIFGKSVTEKVVTLAEIGRLIREGGEEPGSLMEFGLGGDVLGSVLETIK
SEAGEEAFVEIHKSSGLRIEDFKPPAPNRSKILDKFT
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaaccaaccacgcccctccgataatcaacaatatcggcgaactgggcgatcc
gccggctaccaacagcagcagcagcagcaacagccgcaccgatcttccgccgccggttac
ggaaggggagccggagccggcgccggacctgctcccgcctcttccgctactgtcgatccc
tctaatcgcagttttaagaaggctcaaggaggagggcagcagcatcagcatcagcctagg
gtgaatctgcctcctgtgaatcatcattcaaacaatcacaacggtcctcccaatgtacaa
tctcgctctcaaggagcgtctggtgaaccggttattggtggaccggggaattctattagt
ggagctattccaaaggctccaacttcgcagtctcctgctgtgaattccaagagcaatgag
gctcagaacacagctaaaccagtctctggagacccttctaaagcgtttgcttttcagttt
gggtcacttggtcctgatttgatgaagattcctgctcgaactagctcagcgcctcctaat
atggatgagcagaaacgtgcacagatgcagcaagcttctttaaaagcagcaccgaacgtg
ccagtttctgtaccgaaaaataactctccaaataaggctgcagataatcaagtgatgcgg
aaagaggggcgcaatccgtcaagcgataaagcagatgtgcaagtccatcatatgtcccct
ctaagccaaacgcataagtctccaattacgcatatccggatgccttccgtccagacacct
tatcagcagcatccgcaggttcctcaccctgtgcatttcggtgccccgccgaatatgcac
atgcagcctcccaatgtggctccaacctcatttcagatgccaatgcctatggggttacct
atgggaaacacacctcagatccagcagcaagtgttttttcaaggtctcccatcgcacccc
atgcaccatcagggtatgatgcatcaggcgcagggacatggttttgcggctccaatgggt
gctcagattcatcctcagatgggccacgtgggtgtgggtatgagcccgcaatatccccag
cagcaaggagggaaatatggtgggggacgtaagacaacacccgtcaagattacacatccc
gacacgcatgaagagctgagacttggtggacgcggtgacccgcatcaagatggccaacca
caaggtcctaaatcgcatcctaacacacctcccagatcacatccagtgtcagcatttgct
ccacgaccacttaatgttattcaaacctcttttaacaccagtcccatgatataccctcca
gcttctgtacccttcaacagtggtccaatgtcatccgctcaggcaccaagatttcaattt
ccagttgttgatgggtctcagagggtacagtttaccaaccaatctgctcacactgctcca
catgtttcatctgattcttcatctgtgaaagcacatgtgacatcatctgctttccctgca
cctgggagggtaacagtgaagcaagctgctacttctgaaaagcttgaatcacctaaagcc
aggtcacatgaagaaactaacgttgctctgtcacaaaagaaggccgagacaggtttattg
gactctttacagcagccgaaacctggctctgtctccgcattatcaaactcgtctgctcca
ccagcaaaggcacctgtggagactgtcacagttgcaacaactacgatcggaagtgtgcaa
attgtgaatgagtcgagttcagttgaagatcaaacacagacgtgtaaggtggaaccctct
cataatgcaactgaggttcatggacagactcctgtatctgatctcgaaacaaaagccatt
gctgctaaggaaaattcacgacttccagctaccaatgggcttgagaagcaaaacgttcca
gcttctgacgcaccagatacaaaaattgacaaaactgcggaagacctaaactgtgatgag
cggactatttcaggaaagcaagttgaagagtctgtaatttctgatgagaaactcgaaaca
gtatcaggcgtgcttgagaaggcgcataatgaggtggatggtgccacagacataagttcc
gactctgagaaagtagctaaagttgcagatgatacaaactccgagcttccacattctact
catactcagtcatctacggttcctgttggacattctagtaatagtttgacatctgcccca
gcttctctttccaaggataaacctgcttttgaatcgaacataagaagaactacgtctacc
aaaggaaggaagaaaataaaagaaatttatcagaaagcagatgctgcggggacaactgct
gatctctatatggcttataaagggcctgaggagaagaaagagattgcaatgccttcggag
agctctgacgtttcaaacgagaagctggcacctgccatacctcaggatgttgttgaggcc
accatggatgctgaaccggtgaaaaatgaaccggaaaactgggaagatgcagctgatgtt
tccacaccaaagctggaaagtgtgcagggaaagccaggttccgcagatgaggtcagagac
ggctgcagtaatacggaaaagaaatactcccgcgatttcctccttaagtttgcagacatg
tttactgctcttcctgagggctttgacgtttcgcctgatattgctaacgccttgatcttt
gttaatacgggtgcgcctcatcatgaacatggaaaggttatggatcggcaaggtagtagt
ggtcgacgtcccagcaatatgattgatgataggtgggcgaagaatcagggttctcttccc
tcaggacatggaggtaacgcaggtttccgaactggccaaggaggaaactcaggagttcta
agaaaccctcgtatgcagcagggaccgattatgtctagaccgatgcaacctgtgggtcag
atgggaggaatgggcagaaacaacgacttagacaggtggcaacgaggttcaaatttccaa
cagaaaggactttttccttctccgcatactcctatgcaggtgatgcacagagctgagaga
aaataccaagttggtactgttacagatgaagaacaggcaaagcaaaggcagttaaagggc
atcttgaacaagctgactccacaaaactttgagaagctgtttgagcaagttaaaaatgtc
aatattgacaacgttgttacgcttactggtgttatctcacagatatttgacaaagctttg
atggagcctaccttctgtgagatgtatgcagatttctgtgtacatctgtctggggcgtta
cctgaattaaatgaggacggtgagaaggttaccttcaaaagattgctactcaataagtgt
caggaggaatttgaaagaggagagaaagaagaggaagaagccagtagagttgccgaagaa
ggacaagtagaacaaactgaggaggagagggaagagaagagactcaaagtgcggaggaga
atgctcggtaatattagacttattggtgagttatacaagaaaaggatgttgactgagaag
atcatgcacgcatgcatccaaaaattgctcgggtatgatcaggatccacatgaagagaac
attgaagctctgtgtaaactaatgagtacgataggagttatgatcgatcatagcaaagct
aaggtccatatagatgcatattttgacagaatgaagatgctatcaggcaaagaagaattg
tcttctagggtgaggttcatgttaattaatgccatcgatctgagaaagaacaaatggcag
gagagaatgaaggttgaagggccaaagaaaatagaggaagtgcacagagatgctgcacaa
gaacgccaaactcaagctaagaggctttcacgtggaccctcaatgaatgtgtcaggaaga
agagggcatatggagtatagtcctaggggaggaggaggaatgctgtcacctccgagtgcc
caaatgggtggttatcatggaccatcccaaggtcgtggctataataataaccaggacatt
agatttgatgaaaggtcagctcccgcctatgagcctaggatggttccaatgtctcaaagg
tcagtaggtgaggagcctattaccttgggccctcaaggtggtcttggtcaaggaatgtcg
tttagaaagcctgcagtattgtcaaatactctgcagtctgatcctaggcgaccagctgga
ggtttgaatggtgttggctcacaaagacctgcaagtcctgttactcacggacggtcaagt
cctcaagagcggggatcaacttatgttcacagggagttttctcgtgcttctgagccgtca
tcagaagtgtcatctgctaggcaagtaccgcaaggaccatcgtcagcagtaaacagccct
cgagaaaatttgttgtccgaggaacggttacaagatatgtccttgtctgccattaaggaa
tattacagtgcccgagatgagaaggagattggtttatgcatgaaagacataaattcacca
gctttccacccaacaatgatttctctgtgggttactgattctttcgagagaaaagacaaa
gaaagagatctcttggcaaagctccttgttaaccttgtgaaatctgctgacaacgtctta
accgaagcccaactagtgaaagggtttgaaactgttttgacaaccctggaggatgctgtg
aatgatgctccgaaagcagcagagtttctaggaaaaatctttggtaaaagtgtgacagag
aaagtagtgacattggcagagattggtcggttaatacgtgaaggaggagaagaaccagga
agtctgatggagtttgggttaggaggtgatgttcttgggagtgttttggagacaataaag
tcagaagcaggagaagaagcttttgttgagattcacaagagctcaggtctgaggattgaa
gatttcaaacctcctgcacctaaccggtctaagattttagataaatttacttag
DBGET
integrated database retrieval system
