KEGG   Brassica rapa (field mustard): 103862920
Entry
103862920         CDS       T03449                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03083  Polycomb repressive complex
brp04120  Ubiquitin mediated proteolysis
brp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    103862920
   04120 Ubiquitin mediated proteolysis
    103862920
  09126 Chromosome
   03083 Polycomb repressive complex
    103862920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    103862920
   04121 Ubiquitin system [BR:brp04121]
    103862920
   03036 Chromosome and associated proteins [BR:brp03036]
    103862920
Membrane trafficking [BR:brp04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    103862920
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     103862920
   Cul7 complex
     103862920
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     103862920
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     103862920
SSDB
Motif
Pfam: Skp1_POZ Skp1 Ribosomal_L7Ae
Other DBs
NCBI-GeneID: 103862920
NCBI-ProteinID: XP_009138886
UniProt: M4DDF1
LinkDB
Position
A04:1315469..1316364
AA seq 159 aa
MSKKIMLKSSDGESFEVEEEVARQSQTLANLIEDNCADGEIPIANVTSKILGMVVEYCKK
HVVVVDGGDDSSSSSTSEEDLKKWDADFMQIDQSTMFDLILAANYLNVASLLDLATQTVA
DMIAACKDAAEIRAKFGIENDFTPEEEEEIVKENQWAFE
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcaaagaagatcatgttgaagagctccgacggagaatccttcgaggtggaagaagag
gttgctcgtcaatcacagacgttagcaaatctcatcgaagacaattgcgccgatggcgag
atcccgattgcgaacgtcacaagcaaaatcctcggcatggtggtagaatactgcaagaag
cacgtcgtggtggtcgatggaggtgatgattcatcttcctcctccacctccgaggaggat
ctcaagaagtgggacgctgacttcatgcaaatcgatcagtccactatgtttgacctaatc
ttggctgcgaattacttaaacgttgcaagcctgcttgatctcgctacccagacagttgct
gatatgatcgcagcatgcaaggatgctgcagagattcgcgcaaagtttggcatcgagaat
gattttacaccagaggaagaagaagagattgtcaaggagaaccaatgggcttttgaatga

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