Brassica rapa (field mustard): 103863005
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Entry
103863005 CDS
T03449
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103863005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103863005
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103863005
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103863005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
zf-C3HC4
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
103863005
NCBI-ProteinID:
XP_033145588
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All DBs
Position
A04:complement(1822581..1825588)
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AA seq
311 aa
AA seq
DB search
MAPGGSALKEVLESNSTGMDYEVKTTKVEVSNSNNSKSTKSGGAGTGKYGMHSNNGVYEL
LECPVCTNLMYPPIHQCPNGHTLCSNCKARVQNTCPTCRYELGNIRCLALEKVAESLEVP
CRYQSLGCHDIFPYYSKLKHEQHCRFRPYACPYAGSECLVTGDISTLVVHLKDDHKVDMH
DGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDEN
EAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELK
LRVTGRIWKEE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctccgggaggcagtgctttgaaagaagtccttgaatctaactcaacaggaatggat
tatgaggttaaaacaacgaaagtggaagttagtaatagtaataacagcaaatctacaaag
tctggtggtgcaggaactggaaaatatgggatgcattccaacaatggtgtctacgagctt
cttgaatgtccagtttgtacaaacttaatgtaccctccaattcatcagtgtccaaatggt
cacacgttatgttcaaactgcaaagcgagagtgcagaacacgtgccctacatgtcgctac
gagcttggtaacataagatgcttagctctcgagaaagttgcagagtcattggaagttcca
tgccggtaccagagtttggggtgtcatgacatcttcccttactacagcaagcttaagcac
gagcagcattgcaggtttaggccttacgcttgcccttatgctggctctgagtgtttggtt
acaggtgatatctccacgctagttgttcatcttaaagatgatcataaagtcgatatgcat
gacggctgcactttcaaccaccgttatgtgaaatcaaatccacatgaagtcgaaaatgct
acatggatgcttacggtgttcaactgttttgggaggcagttctgtttacactttgaggct
ttccagctagggatggctccagtgtacatggcatttcttcgtttcatgggagatgaaaac
gaggcaaagaagttcagttacagcttggaagtaggagcccatggacgtaaactaacatgg
caagggatccctagaagcatccgtgacagtcacaggaaagtccgtgacagtcaagacggt
ctcatcatcccaagaaacctcgcactctacttctctggaggtgataggcaagaactcaag
ttgagggtaaccggtcgaatctggaaagaagagtaa
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