Brassica rapa (field mustard): 103863052
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Entry
103863052 CDS
T03449
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103863052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
brp03036
]
103863052
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
103863052
INO80 complex (yeast)
103863052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
103863052
NCBI-ProteinID:
XP_009139040
LinkDB
All DBs
Position
A04:complement(2071774..2079171)
Genome browser
AA seq
1482 aa
AA seq
DB search
MDRSRRQPSSDSRYATLFNLEPLRNFTIPRHEDEIENYDETRSNQVANYGNGVKKRKRWI
EEAGDDDDDHYNQHVTEEHYRSMLEEHVQRLKSSSRESQGNHTSLMRKSNVGSYRGNGQR
GRFYDADAISQRRGSYRGSAITPKIAYEPSYLDIGNGVVYKIPPSYDKLVASLNLPSFSD
LRVEDFYLRGALDLRSLEEVMASVKRSGVRSRNGMGEPRPQYESLQARVKALSASNSNPN
FSLKVSDDAMNSVIPEGAAGSTARTILSEGGVLQVHYVKVLEKGDTYEIVERSLPKKLKV
KNDPAVIEKTERDKIRKVWINIVRRDIPKHHRVFTNFYRKQSIDAKRFADGCQREVRYKV
ARSYKLPRSAPIRTRKISRDMLLFWKRFDKQMAEERKKQEKEAAEALKREQELREAQRQQ
QRLNFLIKQTELYSHFMQNKTDSKPSESLSIADENLVDEKLREPAAAEPSEVEDPEEAKM
KADALKATQEAVSKQKKITDAFDTESMKLRQTSDMDGPPNDFSVSGSGNIDLHNPSTMPA
TSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEK
NIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGF
HILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKNSTSIRWKTLLSFNCRNRLLLTGTPI
QNNMAELWALLHFIMPMLFDSHEQFNEWFSRGIENHAEHGGTLNEHQLNRLHAILKPFML
RRLKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGHFNDKKLLNLM
NIVIQLRKVCNHPELFERNEGSSYLYFGVMSNSLLPPPFGELEDVHYSGGKNPITYKIPK
LLQKEMLQSSETFCSSIRRGLSRESFLKHFNIYSPESIFRSIFSSESSVDQAVSGSGAFG
FSRLMDLSPSEVGYLALCSAMERLLFSILKWERQFLDEILDSVMEFVDDDLSGGNITRGK
TRAVTRMLLMPSKLETSLLKGKRGTRPTCHSFESLVVSHQDRLLSNIKLLHSTYTFIPKA
RAPPVSVHCSDRNFAYGTTEEMHQPWLKRLLIGFARTSEANGPRKPNNLPHPLIQEIDSE
LPVVQPALQLTHRVFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMT
KMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQQRSDIFVFLLSTRAGGLGINLTA
ADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQL
VMTGGHVQGDDVFGTADVVSLLMDDADAAQLEQKFRELPLQVRDRQKKKQPVKCIRIDAE
GDAALEELEDAAERRDKEQEPSQEPEKTKPSNKKRKAAASTPKPRVPPKANEEGDAPLQP
QRTKRVKRQTKSVNESLEPVFSASVTAANGEVNPSSSNPDAN
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttcaagaaggcaacccagtagtgactcgcgttacgcaactctcttcaatctc
gagccgttgaggaacttcacgattcctagacatgaagatgagattgagaattatgatgaa
actagaagcaatcaagttgctaactacggcaacggcgttaagaagagaaagcggtggata
gaagaagctggtgatgatgatgatgaccattacaatcaacatgttactgaggagcattac
agatcaatgcttgaggagcatgtgcaaagactcaaaagtagctccagggagtctcagggg
aatcacacatctctgatgcggaagagcaatgtgggcagttacagaggtaatggtcaacgt
gggagattctatgacgcggatgcgatctcacaaagacgaggaagctatcgtggttcagct
attacccctaaaatagcatatgagccttcgtatttggatattggtaatggtgttgtctac
aaaatccctccaagttatgacaagctggtggcgtcattgaacttacctagcttttcagat
cttcgtgtggaagatttttacttgagaggagctctggatctgagatcattagaagaagtg
atggctagcgttaaaaggtctggagttagaagccgtaatggaatgggtgagcctcgacct
cagtatgaatctcttcaagcgagagtgaaggccttgtcagcttcaaactccaacccaaac
tttagcctcaaggtgtcagacgatgcaatgaactctgtcattccagaaggagctgctgga
agcacggcacggactattctatcagagggtggtgttttacaggtccattacgtgaaggtt
ctggagaaaggggatacatatgagattgttgaacgaagtctaccaaagaagctgaaggtg
aagaatgatcctgcagtcattgagaagacagaaagggacaagattagaaaagtctggatc
aacattgtcagaagagatataccaaaacaccatagagtcttcactaacttttatcggaaa
caatcaattgatgccaagagatttgctgatggttgccaaagagaggtgagatataaggtg
gctagatcatacaaattgccaaggagtgcaccaattcgcaccaggaagatatccagagac
atgctgctattctggaagcggtttgacaagcagatggcagaagagaggaaaaaacaggaa
aaagaagctgcagaggcattaaaacgcgaacaggagcttcgagaggcacaaaggcagcaa
cagaggctcaattttcttatcaaacagactgaactttatagtcacttcatgcaaaacaaa
accgattcaaagccttcagaatccttgtcgatagcagatgaaaatctggttgacgaaaag
ctccgagaacctgcagcagcagaaccttctgaggtggaggatcctgaagaggctaaaatg
aaggcagatgccctgaaagctacccaagaggcagtatctaagcagaaaaaaataacagat
gcgtttgacactgaatctatgaagctacggcaaacttctgacatggacggaccaccaaat
gatttctcggtctctggctcgggcaatatagacttgcacaacccatctacaatgcctgct
acatcaacagttcagactccagagttgtttaaaggaactctaaaagaataccaaatgaaa
ggccttcagtggctagtcaattgttatgagcagggtctgaatggcattcttgctgatgaa
atgggcttgggtaagactattcaagcaatggcgttcttggcacatttggctgaggagaaa
aacatctggggtccatttctggttgttgcccctgcttctgttcttaacaattgggctgat
gaaattagtcgtttctgtcctgacttgaaaactcttccatactggggaggattacaagaa
cggaccattttaagaaagaatatcaatcccaagcgtatgtaccgaagggatgctggtttt
catattttaattaccagctatcagctactagtaaccgatgaaaagtattttcgccgggtc
aaatggcaatatatggtgctagatgaggcccaagcaatcaaaaattccaccagtataaga
tggaagacccttcttagtttcaactgtcggaaccgattgcttctgactggtactccaatt
cagaataacatggcagaactatgggccctgctgcacttcatcatgccaatgttgtttgac
agccatgaacaatttaacgagtggttctcaagaggaatcgagaatcatgctgaacatgga
ggcactttgaacgagcaccagcttaacagactgcatgcaatattaaagccattcatgcta
cgacgtctcaaaaaggatgtggtttctgagctaaccacaaagacagaagttactgtacac
tgcaagctcagttctcgacagcaagctttttatcaagctattaagaacaagatttctctg
gctgagttgtttgacagcaaccgtgggcatttcaatgacaagaaattattgaacttgatg
aatattgtcattcaacttagaaaggtttgtaaccatccagagttgtttgaaaggaatgaa
gggagctcatatctctactttggagtgatgtccaattctcttttgccgcctccctttggt
gagctagaggatgtacattattcaggtggtaaaaatcccataacatacaagatacctaaa
ctcctgcagaaagaaatgctccaaagctctgaaacattttgttcttccatcaggcggggc
ttatcaagagaatccttcctgaagcattttaatatatattcacctgaaagtatttttagg
tcaatattctcatctgagagtagcgtagatcaagcagttagtggaagtggagcatttggc
ttttcacgcttgatggatttatcaccatcagaagttggatatctagctttgtgttccgcc
atggaaagactattgttctctatattgaaatgggagcggcaattcttagatgaaatatta
gactctgttatggagttcgtcgatgatgatcttagtggaggtaacatcacaagaggtaaa
accagagctgtcacaagaatgctgctgatgccatcaaaacttgaaacgagtttgctgaaa
gggaaacgaggcacaaggcctacatgtcactcatttgaatctctagtggtttctcatcag
gataggctactttcaaatatcaaactcctacattctacatatacttttatcccaaaagcc
agagctccaccggtaagcgttcattgctcggatagaaactttgcatacggaactacagag
gagatgcatcagccatggcttaagagactattaatcggctttgcacgaacttcagaagct
aatggaccaaggaagccgaacaaccttccacatcctttgatccaagaaattgattcagaa
cttccagttgtacaacctgcgcttcagttgacacaccgagtatttggttcttgtcctcca
atgcaaagttttgaccctgcaaagttgctaacggactctgggaagctgcagacgcttgat
atattgttgaagcggcttcgagctgggaatcacagggtgctcctctttgcacaaatgaca
aagatgctgaacattctggaggattacatgaactatagaaagtataagtatctcaggctt
gatggatcctccaccatcatggatcgccgagatatggttagggattttcagcagaggagc
gatatttttgtattcttgctgagcaccagagctggaggacttggtatcaacttgacggct
gctgacacagtcattttctatgaaagtgattggaatcccaccttggatttacaagctatg
gacagagctcatcgtcttggtcagacaaaagatgtaactgtttatcggctcatctgcaag
gagacggtggaagagaaaatattgcacagggcaagtcagaagaatacagttcaacagctt
gttatgacagggggtcatgttcagggtgatgatgtgtttggaactgcggatgtggtatcg
ttgcttatggatgatgcagatgcagcacaactggagcagaaattcagagaactaccatta
caggtaagggacaggcagaagaaaaaacagccagtgaaatgtatcagaatagatgctgaa
ggagatgcagctttggaagagttggaagatgctgctgaacgacgggataaggaacaggaa
ccttcccaagaaccggagaagacgaaacccagtaacaaaaagagaaaagctgctgcttca
actccgaaacctagagtccctcccaaagcaaatgaagaaggagatgctcctcttcagcct
cagagaacaaaaagggtaaagagacaaacaaagagcgtaaacgagagtcttgaacctgtc
ttctccgcatcagttaccgcagcaaatggagaagtcaatccaagtagctctaatccagat
gctaactaa
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integrated database retrieval system
