Brassica rapa (field mustard): 103863181
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Entry
103863181 CDS
T03449
Name
(RefSeq) beta-hexosaminidase 1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00511
Other glycan degradation
brp00513
Various types of N-glycan biosynthesis
brp00520
Amino sugar and nucleotide sugar metabolism
brp00531
Glycosaminoglycan degradation
brp00600
Sphingolipid metabolism
brp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
brp00604
Glycosphingolipid biosynthesis - ganglio series
brp01100
Metabolic pathways
brp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
103863181
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
103863181
00513 Various types of N-glycan biosynthesis
103863181
00531 Glycosaminoglycan degradation
103863181
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
103863181
00604 Glycosphingolipid biosynthesis - ganglio series
103863181
00511 Other glycan degradation
103863181
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103863181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
brp03110
]
103863181
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
103863181
Chaperones and folding catalysts [BR:
brp03110
]
Intramolecular chaperones
Others
103863181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
103863181
NCBI-ProteinID:
XP_009139188
UniProt:
M4DE46
LinkDB
All DBs
Position
A04:complement(3097170..3101322)
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AA seq
550 aa
AA seq
DB search
MALNLPLRHTLLILFSLSITITTSLPSPSPVTIHQDSPPYLWPLPAEFTSGEETLSMDPS
LSLTVAGNGGGSPIVRAAFDRYMGMIFKHAYNRASSLLTRIRFLSMVEYDITSLKIIVHS
DSEELQLGVDESYTLMVSKKNELSIVAAATIEANTVYGALRGLETFSQLCAFDYSTKSVQ
IYKAPWFIQDTPRFQYRGLLIDTSRHFLPVDVIKQIIESMSFAKLNVLHWHIVDEQSFPF
ETPTYPNLWKGAYSRWERYTVEDASEIVRFAKMRGINVMAELDVPGHAESWGTGYPDLWP
SPSCREPLDVTKNFTFDVISGILADMRKIFPFEFFHLGGDEVNTDCWKNTTHVKEWLHGR
NFTSKDAYKYFVLRAQQIAISKNWTPVNWEETFSSFGKDLDPRTVVQNWLVSDICQKAVA
KGFRCIFSNQGYWYLDHLDVPWDEVYNTEPLNGIHDPSQQKLVIGGEVCMWGETADTSVV
LQTIWPRAAAASERMWSTREAVSKGNITLTALPRLHYFRCLLNNRGVPAAPVDNWYARRP
PSGPGSCYAQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcactgaatcttcctcttcgtcatacccttttgatactcttctcgttatccatcacc
atcactacatctcttccatcgccgtctcccgtgactattcaccaagactctcctccttat
ctatggccattaccggcggaatttacctccggagaagaaaccctctcgatggatccttcc
ctttctctgaccgtagctggaaacggcggcggatctccgatcgttagagctgcattcgac
aggtacatggggatgatcttcaagcacgcttacaatagagcttcttctctcttgacgaga
atcaggttcctgagtatggttgagtatgacatcacttctctcaagatcattgttcactcg
gattctgaagagcttcaattgggtgtggatgagagttatacattgatggtgtctaagaag
aatgagctatctattgtagcagctgccaccattgaggctaatactgtgtatggtgctctt
agaggattggagacgtttagccagttgtgtgcttttgattactcaaccaaatctgtgcaa
atatataaagcaccctggtttattcaagacacacctagattccagtaccgtggtttgcta
atagatacatcaagacattttctaccagttgatgttatcaagcagatcattgaatctatg
tcattcgctaaacttaacgtcctgcattggcacattgtagacgagcaatcgtttcctttt
gagactcctacgtatcctaatctgtggaaaggagcttattcgagatgggaacgttataca
gttgaggatgcctctgagattgtcaggtttgccaaaatgagaggtattaacgtcatggct
gaactagatgttcctggccatgctgaatcatggggaactggataccctgatctttggccc
tctccctcttgccgagagccccttgacgttactaagaactttacattcgatgtgatctct
ggcattttagcagatatgagaaagatattcccatttgagtttttccacttgggcggtgat
gaagtaaatacagattgctggaagaacacaactcatgtcaaggaatggcttcatggtcgc
aacttcacttctaaggacgcatataagtactttgtactcagagcacaacagatagctata
tctaaaaactggacacccgtcaactgggaagaaacattcagttcattcggaaaagatctt
gatccacggaccgtggtgcaaaactggctagtatctgatatatgtcaaaaggcggtagca
aaaggattcagatgcattttcagtaaccaaggatattggtacctcgaccatctagatgtc
ccatgggacgaggtttacaacaccgagcctctaaatggaatccatgatccttctcagcaa
aagcttgtgattggtggagaagtttgcatgtggggtgaaacagctgatacatccgttgta
cttcagacaatttggcctagagctgcagcagcttcagaacggatgtggagcactagagaa
gctgtgtcaaagggaaacataacgctaaccgcattgcctcgtttacactacttcaggtgt
ttactgaataaccgtggggttccagcagctccagttgataactggtacgcacgaagacca
ccctctggacctggctcttgctatgctcagtga
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