Brassica rapa (field mustard): 103863187
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Entry
103863187 CDS
T03449
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103863187
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103863187
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103863187
NCBI-ProteinID:
XP_009139194
UniProt:
A0A397ZIA8
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Position
A04:complement(3138880..3140664)
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AA seq
331 aa
AA seq
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MTTLPYADVDCNLRALAGRAEGFGRFAVGGLHGDLYVVTSLADDGPGSLREGGRRREPLW
IVFAVSGTIHLNSYLSVSSHKTIDGRGQRIKLTGKGIRLKECEHIIICNLEFEGGRGHDV
DGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFGQHDKTMLIGADPSHVD
DRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVEAQVFSQCNIYEA
GVKKKTFEYYPEKAADREEVRAGLVRSENDLFLNGAQASLLTGAGGECVFHPSEHYPTWT
VEPPSDTLKQIIQICTGWQSLSSPSDHGVPK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgctaccatacgccgacgtcgattgcaacctcagagctttagccggccgcgcc
gagggtttcggccgcttcgccgtcggtggtctccacggcgatctctacgtcgtcacatct
ctcgcagatgatggacctggatctctccgcgaaggaggtaggaggagagagccgttatgg
atcgtgttcgcggtctccggaactatacacctcaattcatacttgagcgtctcctctcac
aagacgatcgatgggagaggacaacggatcaagctcacagggaaagggataaggctcaaa
gaatgtgaacatatcatcatttgcaatttggagtttgaaggcgggagaggccatgatgtc
gatgggattcagattaagccaaagtctagacacatttggattgataggtgtagcttgaga
gattacgatgatgggcttattgatatcactaggcagagcactgacatcactgtttctaga
tgttattttgggcagcatgataagacgatgttgattggagcagatccttctcatgttgat
gataggtgtatcagagtgacgattcatcattgtttctttgatggaactaggcagaggcat
cctcgtctcaggtttggtaaagttcatttgtataacaattatacaagaaactgggggata
tatgctgtctgtgccagcgtagaagcgcaggtgttctctcaatgcaatatatacgaagct
ggagtgaagaagaagacttttgaatactacccagagaaggctgctgacagggaagaagta
agagctggattggttcgatctgagaatgacttgttcttgaacggagctcaagcttctttg
ttgacaggggccgggggagaatgtgtgttccatccaagcgagcattacccgacatggacc
gtggagcctccatcggatactctcaagcaaatcatccaaatctgtactggttggcaatct
ttatcctctccttcagatcatggcgttcctaagtaa
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